Thiomonas intermedia: Tint_1856
Help
Entry
Tint_1856 CDS
T01227
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tin
Thiomonas intermedia
Pathway
tin03030
DNA replication
tin03430
Mismatch repair
tin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tint_1856
03430 Mismatch repair
Tint_1856
03440 Homologous recombination
Tint_1856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tin03032
]
Tint_1856
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_1856
Enzymes [BR:
tin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tint_1856
DNA replication proteins [BR:
tin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tint_1856
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tint_1856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
DNA_pol3_tau_5
AAA_30
AAA_18
AAA_14
AAA_16
RCF1-5-like_lid
AAA_2
AAA_19
AAA_assoc_2
nSTAND3
TsaE
SKI
Herpes_Helicase
Rad17
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADG31224
UniProt:
D5X278
LinkDB
All DBs
Position
complement(1992285..1994123)
Genome browser
AA seq
612 aa
AA seq
DB search
MTSVALARKWRPKSFASLVGQDHVVRALTHALDHDRLHHAYLFTGTRGVGKTTVSRILAK
ALNCTGPDGQGGVTSQPCGVCPACTEIDAGRFVDYIELDAASNRGVEDMTTLLEQAVYKP
TAGRFKVYMIDEVHMLSNHAFNAMLKTLEEPPDYVKFVLATTDPQKVPVTVLSRCLQFNL
KQMMPGAIVGHLQQVLQAENVPADDAALRLIARAAHGSMRDALSLTDQALAYCAGRVETE
AVQQMLGTVDRSDLLLILQALASQDGVALIHQADALEARGLSFGAALEELAALLQTIALL
QLVPQAADADDPQHEALVALAAQLSPELVQLAYTTVLHGRNELSLAPDDRTGFTMTLLRL
LAFAPVIAGSVPSLPPGGLALPKAAAPASPPSQSAAAQVAAQREQPATKSATPVQTAAKA
MPRTAATLSAPLAPAAPVLAAEEAPATSYAAKPEPQTQPQPTPPRPADIKPPLQITPHIA
SDTDWPTLVQRLDVPAGLPRALAQQSELVAMQGMDWLLRVPNEQLTRAGSLDKLQTAVRL
ALGQDIVLRAEAGEVTDSVMQRDARAKAQAQADAEAAIRNDPLVQQLMHDLGAQIVPGSL
KPMPPSAQPTSA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgtcgcgctggcgcgcaagtggcgccctaaatcattcgcctccctcgtggga
caagaccatgtggtgcgggcactcacgcatgcgctcgaccacgaccgtctgcatcacgcc
tatttgtttaccggcacgcgcggggtgggcaagaccacggtgtcgcgcattctggccaag
gcgctcaattgcaccgggccggacgggcagggcggcgtcaccagccagccatgcggcgtg
tgcccggcgtgcaccgagatcgacgccgggcgctttgtcgattacatcgagctcgacgcc
gcctccaatcgcggggtcgaagacatgaccacgctgctggagcaggcggtctacaagccc
acggcggggcgcttcaaggtgtacatgatcgacgaggtgcacatgctctcgaaccacgcc
ttcaacgccatgttgaagacgctggaagagccgcccgattatgtgaagttcgtgctcgcc
accaccgacccgcagaaggtgccggtcacggtgctgtcgcgctgcctgcagttcaacctc
aagcagatgatgccgggcgccatcgtcggccatttgcagcaggtgctgcaggccgagaac
gtgccggcagacgacgccgcgctgcggctcatcgcccgcgccgcgcacggttcgatgcgc
gatgcgctctcgctcaccgaccaggcgctggcttactgcgccgggcgggtggagaccgag
gcggtgcagcagatgctgggcacggtcgatcgcagcgatctgctgctcattctgcaggcg
ctggcctctcaagacggtgtggcgctcatccatcaggccgatgcgctggaggcgcgtggt
ctgtctttcggcgcggcgctggaagagctggccgcgctgctgcaaaccattgccctgctg
caactcgtgccgcaggccgctgatgccgacgatccgcagcatgaagcgctggtcgccctg
gccgcgcaactcagcccggagctggtgcaactggcctacaccacggtgctgcacggccgc
aacgagctttcgctcgccccggacgaccgcaccggcttcaccatgaccctgctgcgcctg
ctggccttcgccccagtcatcgcgggcagcgtgcctagcttgccgccaggcgggctggcg
ctgcccaaggcggcggctccggcttcgccaccgtcgcagtcggctgcggcgcaggtcgca
gcacagcgcgagcaaccggccaccaaatccgcgaccccagtgcaaaccgcagccaaggcc
atgccgcgtaccgcagcgaccttgagcgccccattggcgcccgccgctcccgtgctcgcc
gcggaggaagcgcccgcgacaagctatgcggctaagcccgaaccgcaaacccagccgcag
cccacgccaccccgccccgccgacatcaagccgcccctgcagatcacgccccacatcgcg
tctgataccgactggcccacgctggtgcagcggctcgacgtgcccgcgggcttgccgcgc
gcgctggcgcagcaaagcgaactggtggccatgcaaggcatggattggctgctgcgcgtg
cccaacgaacagctcacccgtgccgggtcgctcgacaagctgcagaccgccgtgcgtctg
gccttggggcaagacatcgtgctgcgcgccgaagccggcgaagtgactgacagcgtgatg
cagcgcgacgcgcgcgccaaggcccaggcgcaggccgatgccgaggctgcgatacgcaac
gatccgctggtgcagcagctcatgcacgatctgggcgcgcaaatcgtgcccggcagcctc
aaacccatgcccccgtcagcgcagccgacatccgcctga
DBGET
integrated database retrieval system
