Thiomonas intermedia: Tint_2101
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Entry
Tint_2101 CDS
T01227
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tin01011
]
Tint_2101
Enzymes [BR:
tin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Tint_2101
Peptidoglycan biosynthesis and degradation proteins [BR:
tin01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Tint_2101
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
DUF4384
GA_3
Peptidase_M56
Motif
Other DBs
NCBI-ProteinID:
ADG31452
UniProt:
D5X394
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All DBs
Position
2245911..2247542
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AA seq
543 aa
AA seq
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MVAMAAGCAAVPPSEKTAASSLTSPPSSSTAAASAAAEPDTPLKAEVVGGGAITPAEQTA
LQDDTKDITPQYNDIWQRIRAGFAIPNMDSPLVAQAAQWYTTRPDYVARMTERARKYLYY
TVQEVQKRGMPTELALLPFIESAYNPDARSVAHAVGMWQFIPSTGKHYNLKQNMFQDDRR
SVLASTNAALDYLQNLYNMFGNWQLALAAYNWGEGSVQRAIAYNKAHNLPVDYQDLRMPN
ETRNYYPKLQAVKDIISDPAKYGITLPDIPDHPYFKAVTITRDIDVSLAAKLAGLTPDEF
RSLNPSYTKPVILGATNPRILLPYDNATHFAQALQAYNGPLSTWTAYTVKATQSPMQLAS
ELKVSEAVLRETNDIPARQLIRAGSTVLIPKADDGSNKNVSAAVAENAVLAFAPEAPPGR
RMVLRVGRYGDSVQGVAHRYHLSPLQVAQWNRTTERGIFRKGQFVTIYVTHTPRIFVAER
QADERRIVAERKVVKRRVVAERKPQVKRRNIVRQPVKVAERQRKELHYSVQTRDKKLIDV
AQQ
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcaatggccgccggatgcgccgccgtccctccctccgaaaaaaccgcagcctca
tctctaacctcaccgcccagcagttctaccgccgccgcttccgcagccgctgaacccgac
acaccgctcaaggccgaggtggtcggcggcggcgccatcactcccgcggagcaaacggcg
ctgcaagacgacaccaaggacatcaccccgcagtacaacgacatctggcaacgcatccgc
gccggtttcgccattcccaatatggacagcccgctggtggcgcaggcggcgcagtggtac
accacccggcccgactatgtcgcccgcatgaccgagcgtgcgcgcaaatacctctactac
accgtgcaggaagtacagaagcgcggcatgcccaccgagctggcgctactgcctttcatc
gagagcgcctacaaccccgacgcgcgctcggtggcccacgccgtgggcatgtggcagttc
attccgtccaccggcaagcactacaacctcaagcagaacatgttccaggatgatcgccgc
agcgtgctggcctcgaccaacgccgcgctcgactatctgcagaacctctacaacatgttc
ggcaactggcagctcgccctggccgcctacaactggggcgaaggcagtgtgcaacgcgcc
attgcctacaacaaggcgcataacctgccggtcgattaccaagacctgcgcatgcccaac
gaaacccgcaattactaccccaagctgcaggcggtgaaagacatcatttccgacccggcc
aagtacggcatcaccctgcccgacattcccgatcatccctacttcaaggcggtcaccatc
acgcgcgatatcgacgtgtcgctggctgccaaactggccggcctgacgcccgacgagttc
cgctcgctcaacccctcctacaccaagccggtgatcctgggggcgaccaacccgcgcatt
ctcttgccctacgacaacgccacgcactttgcgcaagcgctgcaggcttacaacggcccg
ctgtccacctggacggcctacaccgtcaaagctactcagtcgccgatgcaactggcgagc
gaactcaaggtcagcgaagccgtgctgcgcgaaaccaacgacattccggcgcggcagctc
atccgggccggttcgaccgtgctgattcccaaggcggatgacggcagcaataaaaacgtc
agcgcggccgtcgccgaaaacgcggtgctggcctttgcgcccgaagccccgccggggcgt
cgcatggtgctgcgcgtcggccgatatggcgactcggtgcagggcgtagcgcaccgctat
cacctcagcccgctgcaagtggcgcagtggaaccgcacgaccgagcgcggcattttccgc
aagggtcagttcgtgaccatttacgtcacgcacaccccgcgcattttcgtggctgagcgc
caggcggacgagcggcgcatcgtggccgagcgcaaggtggtcaaacggcgcgtggtggcc
gaacgcaaaccgcaggtcaagcgccgcaacatcgtgcgccagcctgtcaaggtcgccgag
cgtcagcgcaaagaactgcactacagcgtgcagacgcgagacaagaagctgatcgacgtc
gcgcagcagtaa
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