Thiomonas intermedia: Tint_2405
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Entry
Tint_2405 CDS
T01227
Name
(GenBank) pseudouridine synthase, RluA family
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tin03009
]
Tint_2405
Enzymes [BR:
tin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Tint_2405
Ribosome biogenesis [BR:
tin03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Tint_2405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ADG31754
UniProt:
D5X4U0
LinkDB
All DBs
Position
complement(2563666..2564655)
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AA seq
329 aa
AA seq
DB search
MHTAPSPQVRLLQVGDAGEGQRLDNFLARHLKGVPLSHIHRIVRSGEVRVNGGRASADQK
LQSSDQVRIPPVRVAQPDTPRSAPALQFPIVFEDDFLLAINKPEGVAVHGGSGVSFGVIE
ALRAARPTAKFLELVHRLDRDTSGLLLIAKKRSALTTLHAALRERHADKRYLALVAGLWT
RGAVMIEAPLHKYLLANGERRVRVDAQQGQESRTQFRSQEQFALPGLGPWGGLSLMQARL
LTGRTHQIRVHLAHCGHPIVGDDKYGDDSLNALLARGQAGVPPFRRMFLHAESLTIAHPA
SGERLELRAPLPENCAQWLHHLRAQCAQS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgcgccatctccccaggttcggctccttcaggtcggcgatgcgggcgagggg
cagcggctggataactttctggcgcgccacctcaagggcgtaccgctcagccatattcat
cgcatcgtgcgatcgggcgaagtgcgggtcaatggcggtcgggccagcgcagatcagaaa
ctgcagtcgagcgatcaggtgcggattccgccggtgcgggtggcgcagcccgacacgccg
cgcagcgctccagcgctgcagtttccgatcgtgtttgaagacgattttctgctggcgatc
aacaaacccgaaggcgtggcggtgcatggcggatcgggggtgagcttcggcgtgatcgag
gctttgcgcgcagcgcggcccacggcgaagtttctcgaactggtgcaccggctcgaccgc
gacacctcgggtctgctgctcatcgccaagaagcgcagcgccttgaccacgctgcacgcg
gcgctgcgcgaacgtcatgccgacaaacgctacctcgcgctagttgccgggctctggacg
cgtggggcggtgatgatcgaggcgccgctgcataaatacctgctcgccaatggcgaacgg
cgcgtgcgggtggacgcgcagcaggggcaagagtcgcgtactcagtttcgttcccaagag
caatttgcgctgccgggcctggggccttggggcggcttgagcctgatgcaggcgcggttg
ctgacggggcgcacccatcagatccgggtgcatctggcgcactgcggccatcccatcgtc
ggcgacgataaatatggggatgacagcctcaacgccctgctggcgcggggtcaggcgggc
gtgccgcccttccggcgcatgtttttgcacgccgagtcgctgacgattgcgcacccggca
agcggcgagcggctggaactgcgcgcgcccttgcccgaaaactgcgcgcaatggcttcat
catttgcgggcacaatgcgctcagtcctga
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