Thiomonas intermedia: Tint_2544
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Entry
Tint_2544 CDS
T01227
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_2544
Enzymes [BR:
tin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Tint_2544
DNA repair and recombination proteins [BR:
tin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Tint_2544
Prokaryotic type
Tint_2544
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADG31885
UniProt:
D5X5J2
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All DBs
Position
complement(2710978..2712471)
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AA seq
497 aa
AA seq
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MPTSIADRPASSAVEKLPLGLVWLRRDLRLHDNAALHAALRACDKVALAFVFDRDILDPL
LQRGLQADRRVEFILAAVAEIDAALRERGAALIVRHASAREAIPVLAAELGAQAVFCGRD
DEPAALARDAAVERALRQDGRALHSVKEHMIFERDEVLTAQDKPYSVFTPYRTAWLARYA
AQPQQPVDSAVTSARLAALPAALQQPLPTLSELGFAPSNLHALKLPLGASGASALVDDFS
RRIDDYDQARDYPARKGPSYLSVHLRFGTVSVRELVAMAWARQQAGSEGARVWLSELVWR
DFYFQILFHHPHVVNAAFKPVYDRIQWRNDPAQFAAWCEGRTGYPLVDAAMRQINQTGYM
HNRLRMVVASFLTKDLGIDWRWGERYFADHLNDFDLAANNGGWQWAASSGCDAQPYFRIF
NPVAQSEKFDAGGDFIRRYVPELAQLASKDIHAPWKAPAALLQAAGVRLGSTYPAPIVRH
DLARAETLERYAVVKAQ
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgccgacttccattgccgaccgtcccgccagctctgccgtggaaaaactgccgctcggt
ctggtctggctgcggcgcgatttgcgcctgcacgacaacgcggcgctgcacgccgccctg
cgcgcctgcgacaaggtggcgctggcgtttgtgttcgaccgagacattctcgatccgctg
ctgcagcgcgggctgcaggcggatcggcgggtggagttcattctggctgcggtggcggag
atcgacgccgctttgcgcgagcgcggcgccgcgctgatcgtgcgccacgccagcgcgcgc
gaggcgatccccgtgctggctgccgagttgggcgcgcaggcggtgttctgcgggcgcgac
gatgagcccgcagccctcgcgcgcgatgcggccgtcgagcgcgccttgcggcaagacggg
cgggcgctgcacagcgtcaaggagcacatgattttcgagcgcgatgaggtgttgacggcg
caggacaagccgtactcggtctttacgccctaccgcaccgcctggctggcgcggtatgcc
gcacagccgcagcagcccgtcgatagcgcggtgacctccgcccggctggccgcgctgcca
gcggcgttgcagcaacctttgcccactttgtccgagctgggttttgcgccgtcgaatttg
cacgcgctgaaactgccgctgggcgcgtctggcgcgtcggcgctggtggacgacttcagc
cgtcgcatcgatgactacgaccaggcgcgcgactacccggcgcgcaaggggccgagctat
ctctcggtgcacctgcgcttcggcacggtctcggtgcgcgagctggtcgcgatggcctgg
gcgcggcagcaggcaggcagcgagggggcccgggtctggctgtccgagctggtgtggcgt
gatttttattttcagattctgttccaccatccgcatgtggtgaatgcggctttcaagccg
gtttacgaccgcattcagtggcgcaacgacccggcgcagttcgccgcctggtgcgagggc
cgcaccggctatccgctggtggacgcggccatgcgccagatcaaccagaccggctatatg
cacaaccggctgcgcatggtggtagcgagttttttgaccaaagacctgggtatcgactgg
cgctggggcgagcgctactttgccgatcatctcaacgatttcgacttggccgccaacaac
ggcggctggcagtgggcggcgagcagcggctgcgatgcgcagccgtacttccgcattttc
aacccggtggcgcaaagcgagaaattcgatgcgggcggcgatttcatccgccgctatgtg
cccgagctggcgcagcttgcgtccaaggacattcacgcgccgtggaaggcgcccgcagcg
ctgctgcaggcggccggggtgcggttgggcagcacttaccccgcgccgatcgtgaggcac
gatctggcgcgggccgaaacgctggaacgctacgcggtggtgaaggctcagtga
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