Thiomonas intermedia: Tint_2659
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Entry
Tint_2659 CDS
T01227
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
tin
Thiomonas intermedia
Pathway
tin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tint_2659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tin03400
]
Tint_2659
Enzymes [BR:
tin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Tint_2659
DNA repair and recombination proteins [BR:
tin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Tint_2659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADG32000
UniProt:
D5X683
LinkDB
All DBs
Position
2825738..2829259
Genome browser
AA seq
1173 aa
AA seq
DB search
MTDDIRPGLFILQGNRLELLRDALLEWLAQQPLAPLEEEVILVQSNGAAEWLKMALAAQG
GICAATRVELPGRFLWRTYRQVLGRAATPSQSPLDKPLLTWRLMRLLGAPGAELHPARPP
WESRKLGAAQRFLEGGTLDADVCAPLLQYLQGQDLLRRLQLAQRLADLYDQYQIYRDDWL
DAWAQGRDVLIDALGRATPLPEDQRWQAWLWRRVLAELSEAERQSTRAQVQRAMLQALNT
ADIAADPTRPALPRRVVLFGASHLPTVVLDALVALSRYVQVLIALPNPCRYHWADIIEGR
ELLRAAPARRPLRAGDLAQVSLEVMHAHAHPLLAAWGRQGRDFMRQLDAFDERANAADRP
GLPRHDLFDDAPGDTLLEQMQAAIRDLLPLPEHSRTLISAADRSVVFHIGHSAQREVEIL
HDQLLHLLAQPSGGRPLRPRDIVVMTPDIAPFAPAIRAVFGQYPPGDERFIPFDIADLSA
RATEPLLLALDWLLRLPQERILASDISALLDVPAIARRFGLRPEDRPRLTQWIVGAGVRW
GLDVDHRAHLGLGACGEQNSWRFGLRRMLLGYAGAGEDGFENIVPFDEIGGLDAALVGPL
ADLLDVLQAWWRTALQNATPGQWAQYARDLLDAISLPQDLRERETRARLDDALSTWLDHC
AAAQFDEAVPLQVLRESWLSGLDEAAGGGRFLAGGVTFCTLMPLRAIPFEVVCLLGMNEG
DYPRRSPHSDFDLLHQPGQYRPGDRARREDDRYLMLEALLSARRMLYVSWAGRSPRDNTE
QPPSVLVAQLRDYLAAGWQGEGQGDLLAQRTTVHPLQPFSRRYFEGDAALFTYAREWRQA
HGGVAENGTGNGNGPMPFEPLTEPLSLQQLARFLKNPVKAFFRTRLDVVFDELQTQDDDE
VFALDGLDRHSLLSHLIDDPQAAVYEGIEAAVARRVRQLQGSGALPMRALGSRVAQGLEQ
EALPLLRSWSELAQAYPQAVDKRALIVEHQDLRLDDWLDGLRTGGQSPIWMQLNASRLSD
GKAQARAEKLIDAWVRQMAASACGHAVQGLLIGADARVDLPSLPPAEARDHLHTLLAAWQ
EGMRRPLPFTARTALAELKNRKGQEVYEGGYCTSGEVEEPCLARTFPDFASLSADGRFET
YLAELFRPLADWAAQAVVIRHGQTPAAGTKEAA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgatatccgccccggcttgttcattctgcagggcaatcgcctggaattgctg
cgcgatgccctgctggaatggctggcgcagcagccgctggcgccgctggaggaagaggtc
attctggtgcagagcaatggcgctgcggagtggctgaaaatggcgctggccgcgcagggc
ggcatttgcgctgctacgcgggtggaactgcccgggcggtttctgtggcgcacctatcgg
caggtgctggggcgtgcggccacgccgtcgcaatcgccgctggacaagccgctgctgacc
tggcgcctgatgcggcttttgggcgcccccggagccgagctacacccggcccgccccccg
tgggagtcaaggaaacttggggcggcccagcgtttccttgagggcggcacgctcgatgcg
gacgtttgcgcgccgctgttgcaatatctgcagggtcaagacctgctgcgccgcctgcaa
ctggcgcagcgtctggccgacctctacgaccagtatcagatctaccgcgacgactggctc
gacgcctgggcacagggccgcgatgtgctcatcgacgcgctcgggcgcgcgacgcccttg
cccgaagatcaacgctggcaggcctggctgtggcgccgggttctggccgagctgagcgaa
gcggagcgtcaatccacccgtgcgcaggtgcagcgcgccatgctgcaggcgctgaatacg
gccgatatcgcagccgacccgacccgacccgcgctgccgcgccgggtagtgctgtttggc
gcttcgcacctgccgaccgtggtgctcgatgcgctggtggcgctgtcgcggtatgtgcag
gtgctgatcgcgctgcccaatccctgccgttatcactgggccgacatcatcgagggccgc
gagctgctgcgcgcggcaccggctcgcaggccgctgcgggcgggcgacctggcgcaggtc
agtcttgaggtcatgcacgcccacgctcatccgctgctggcggcctgggggcggcagggc
cgcgatttcatgcgccagctcgatgccttcgacgagcgggcgaacgcggcagacaggcct
ggtctgccgcggcacgacctgttcgatgacgcgcccggtgacacgctgctcgaacagatg
caggccgccatccgcgatctgctgcccttgcccgaacattcgcgcacgctcatttccgcg
gcggatcgttcggtggtgtttcacatcggccacagcgcgcagcgcgaagtcgaaatcctc
cacgaccagttgctgcatctgctggcgcagcccagcggcgggcgcccgctgcggccgcgc
gacatcgtggtgatgacgcccgatatcgccccgttcgccccggccatccgggcggtgttc
ggccagtatccgccgggggatgagcgcttcattcccttcgacatcgccgacctgtcggcg
cgggcgaccgaaccgctgctgctcgcgctggactggctgctgcgcctgccgcaagagcgc
attctggcctccgacatcagcgccttgctcgatgtaccggccattgcccggcgcttcggc
ctgcggcccgaagaccggccaaggctgacgcaatggatcgtcggcgcgggcgtgcgctgg
gggctggacgtcgaccatcgcgcccatctcggcctgggcgcctgcggcgagcaaaacagc
tggcgcttcggcctgcgtcgcatgctgctgggctatgccggggcgggcgaagacggcttt
gagaacatcgtgcccttcgacgaaatcggcgggctggatgctgccctggtcgggccgctg
gccgatctgctcgacgtgctgcaagcctggtggcgtacagccctgcaaaacgccacgccg
ggccagtgggcgcaatacgcacgcgatctgctcgacgccatcagcctgccgcaagacctg
cgcgagcgcgaaacccgcgcccgcctcgacgatgcgctctccacctggctcgaccattgc
gccgccgcgcagttcgacgaagccgtgccgctgcaggtgctgcgcgagagctggctgagc
gggctggacgaggccgcgggcggcgggcgctttctcgccggtggcgtgaccttctgcacc
ctgatgccgttgcgcgccattcccttcgaagtcgtctgcctgctgggtatgaacgaaggc
gactacccgcgccgcagcccgcacagcgacttcgatctgctgcatcagcccgggcaatac
cggcccggagatcgcgcccggcgtgaagacgatcgctacctcatgctcgaagcgctgctg
tcggcgcgccgcatgctctatgtgagctgggccggccgcagcccgcgcgacaacaccgag
cagccgccgtcggtgctggtggcgcagttgcgcgactatctcgctgcgggttggcaaggc
gaaggacagggcgatctgctcgcgcagcgcaccaccgttcatcccctgcaacccttcagc
cgccgctacttcgagggcgacgccgcgctgttcacctatgcccgcgagtggcggcaggcg
catggcggcgtggccgagaacgggaccgggaacggaaatgggccgatgccgttcgagccg
ctcaccgaaccgctgagtctgcagcaactggcccgcttcctgaaaaatccggtcaaggcg
tttttccgcacccggctcgacgtggtgttcgacgaactgcagacgcaggacgacgacgaa
gtcttcgcgctcgacgggctcgaccgtcacagcctgctcagccacttgatcgacgatccg
caggccgccgtgtatgaaggcatcgaggcggccgtcgcgcgccgggtgcgccagttgcag
ggcagcggggcgctgcccatgcgcgcgctgggcagcagagtggcgcaaggtctggagcaa
gaggcgttgccgcttttgcgcagttggtccgagctggcgcaggcctatccgcaggcggtg
gacaagcgggcgttgatcgtcgagcaccaagacctgcggctggacgactggctcgacggc
ctgcgcacaggcggccaaagcccgatctggatgcagctcaacgcttcgagactgagcgat
ggcaaagcgcaggcgcgcgctgaaaagctgatcgacgcctgggtgcggcagatggcggcc
agcgcctgcggtcatgcggtgcagggcttgctcatcggcgccgatgcgcgggtggatctg
ccgtcgctgcctccggctgaggccagagatcaccttcacaccctgctggccgcctggcaa
gagggcatgcgccgcccgctgccgttcaccgcccgcaccgccttggccgagctgaaaaat
cgtaaggggcaagaggtctatgagggcggctattgcacttcgggtgaagtcgaggagccc
tgcctcgcccgcaccttccccgactttgccagcctgagcgccgatgggcgcttcgagact
tacctagccgagctgttccggcccttggcagactgggcggcgcaggccgttgtcatccgc
cacggccagacgcccgctgcgggcacgaaagaagccgcatga
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