Thiomonas intermedia: Tint_3102
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Entry
Tint_3102 CDS
T01227
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
tin
Thiomonas intermedia
Brite
KEGG Orthology (KO) [BR:
tin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tin03019
]
Tint_3102
Messenger RNA biogenesis [BR:
tin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tint_3102
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
ADG32429
UniProt:
D5X001
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All DBs
Position
complement(3285830..3286786)
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AA seq
318 aa
AA seq
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MTDLTHPCPSDLPTLPQIYRLSSVNSRADAAGCLHHTAHLFHTQASFKACWSSGQLDARL
RSGVLVSPRWSGPGRSENGCLAIARLVVLERPVADLGLFQTALPGWPVEPALLQRAHRLW
EALPASHRLLLNALFWDAERFRRFCTGPSSMEGHHHDEAGNLRHTVEVAEQVRALATDRA
YVDRDLAVLAALLHDAGKAEEYRRRADGSWGMSDRGRLIGHRTTVIEWVAGAIARWRIRL
PAGHEMALLHILAAVAHAPAWMGLREPQTPEAELLSLADRLSGTDDLMQRLLPNGAGWGA
YHKHLGRRPYRVAAPELV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcacgcacccctgtcccagcgacttgccgacgttgccgcagatctaccgg
ctatccagcgtaaacagccgcgccgatgcggccggatgtttgcatcacacggcccatctg
tttcacacccaggccagtttcaaagcctgctggtcctccggccaactcgatgcccggctg
cgcagcggcgtgttggtcagtccgcgctggagcggccctgggcgcagcgagaatggctgc
ctggccatcgcacggctggtggtcttggagcggcccgtggccgacctgggattgttccag
accgcattgcccggatggccggtagagcctgcgctactgcagcgcgcgcaccggctgtgg
gaggctttgccggcttcccaccgtctattgctcaacgccctcttttgggacgcagagcgg
tttcgacggttctgtaccgggccgtcttcgatggaaggacaccatcacgacgaagcgggc
aatctgcgccacaccgtcgaagtggctgagcaggtgcgcgcactggcgaccgaccgggcg
tatgtcgaccgggatctggctgtgctggcggcgctgttgcacgacgctggcaaggcggag
gagtatcggcggcgtgccgatggcagttgggggatgagcgaccgcgggcgactcattggt
caccgcaccaccgtcatcgaatgggtggctggcgccatcgcccgctggcgcatccgcctg
cctgccggacacgagatggcgctgctgcacattctggccgccgttgcgcatgccccggcg
tggatgggcctgcgagagccgcagacgccggaagcggagctgctctcgctggccgaccgg
ctctccgggacggacgatctcatgcagcgattattgcccaacggggcaggctggggcgcc
tatcacaaacacctgggacggcgaccctatcgggtggcagcgcccgagttggtgtga
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