Thermophilibacter immobilis: INP52_06045
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Entry
INP52_06045 CDS
T07753
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
tio
Thermophilibacter immobilis
Pathway
tio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
INP52_06045 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tio03021
]
INP52_06045 (rho)
03019 Messenger RNA biogenesis [BR:
tio03019
]
INP52_06045 (rho)
Transcription machinery [BR:
tio03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
INP52_06045 (rho)
Messenger RNA biogenesis [BR:
tio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
INP52_06045 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
NACHT
Spore_III_AA
AAA_25
HeH
SAP
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QOY59993
UniProt:
A0A7S7M8V5
LinkDB
All DBs
Position
complement(1348288..1350285)
Genome browser
AA seq
665 aa
AA seq
DB search
MSDDVTPVSASASADDQPAKPRRHRRTKAEMAAARAQEAAAREAAEKAGEPWPPKRRRTR
SKASAPEKPAPAHEESAPAREDSVKQVPSVPEPSAEPASEATRPVAGEPASHKTGAPKRR
RTHRHDEVPASSPTASASAPDEMTQLTQEATKASSEPTQMPAQTLGAPSFEHRRETSAHA
PVPANRQPQADSSHMSRKHRRPGDHSGSGNGYQSRRQANNQGGQNNQGRHRNRRQQDSSL
SPSLTRDELIKLKVAELRSKAAELGVEYVGVRKPELVEAVYAAAAQAEGFRPVEGILEIG
NEGYGWIRTGNYMEGDGDAFVYQQLIRSLGLRPGDRVAGTVGPGRSNSKYPPLQSVRTVN
GQPPEGLKVRPRFRDLTPVFPNERLAMECDKSSITGRAIDLVSPIGKGQRGLIVSPPKAG
KTTVLKKICQSIAANNPEVHLFCLLVDERPEEVTDMERSIKGEVVASTFDMPADNHTRVS
ELVIEHAKRLVETGEDVVVVLDSITRLARAYNLAQPASGRILSGGVDSAALYPPKRFLGA
ARNIENGGSLTIIASALVDTGSKMDEVIFEEFKGTGNMELKLDRDLADKRIFPAIDPVSS
GTRNEDLLIDAEYQPFVWGIRRVLANMNNTERAANALIKGLRETESNSEFLILSAKKAQK
TGYIA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgtaacgcccgtttccgcctcggcttcggccgacgaccagccggcaaag
ccccggaggcatcgacggaccaaggcggagatggcggccgcacgcgcgcaggaggcagct
gctcgggaggccgcggagaaggcgggggagccctggccgcccaagcgtcgtcgcacccgc
tcgaaggcgagcgcccctgagaagcccgcgcccgcgcatgaggagtccgcacctgcgcgc
gaggactcggtgaagcaggtcccgagcgtccccgagccctctgcggaacctgcctccgag
gcgacccgccccgtcgcgggcgagcccgcgtcccacaagaccggagcccccaagcgtcgc
cgaacccatcgccacgacgaggtgcccgcctcgtcccccactgcctccgcctctgcgccc
gacgagatgacgcagctcacccaggaggcaaccaaggccagctcagagccaacgcagatg
cctgcgcagacgctgggcgcaccctccttcgagcatcgtcgcgagacgagcgctcacgct
cctgtgcccgcgaacaggcagccccaggcggactcctctcacatgagccgcaagcaccgt
cgcccgggtgaccactccggcagcggcaacggctatcagagccgtcgccaggcaaacaat
cagggggggcagaacaaccagggacgtcatcgcaaccgacgtcagcaggactcctcgttg
tcgccctctctcacgcgcgacgagctcataaagctgaaggtcgcggagctgcgctccaag
gcggccgagctgggcgtcgagtacgtgggcgtgcgcaagcccgagctcgtcgaggccgtc
tacgccgccgccgcccaggccgaggggtttcgccccgtcgagggcatcctcgagatcggg
aacgagggctacggctggattcgcacgggcaactacatggagggcgacggtgacgccttc
gtctaccagcagctcattcgctcgcttggcctgcgtcccggcgaccgcgtggcgggaacc
gtgggccccggtcgctccaacagcaagtatccgccccttcagagcgtgaggaccgtcaac
ggccagccgcccgaggggctcaaggtacgcccgcgttttcgcgacctcacgcccgtcttt
cccaatgagcgcctggccatggagtgcgacaagagttcgatcacgggtcgcgcgatcgac
ctcgtctcgccgatcggcaagggccagcgcggccttatcgtcagcccccccaaggccggc
aagacgactgttctcaagaagatctgccagtccatcgccgccaacaaccccgaggtgcac
ctcttctgcctgctcgtggacgagcgccccgaggaggtcacggacatggagcgctcgatc
aagggcgaggtcgtggcctcgaccttcgacatgcccgccgacaaccacacgcgcgtctcc
gagctcgtgatcgagcacgccaagcggctcgtggagacgggcgaggacgtcgtggtggtg
ctcgactcgattacgcgcctcgcgcgcgcctacaacctcgcacagcccgcgagcggccgc
atcctgtccggcggcgtggactccgccgcgctctacccgcccaagaggtttctgggcgcg
gcgcgcaacatagagaacggcggctccctcacgattatcgcctctgcgctcgtggacacg
ggatcaaagatggacgaggtcatcttcgaggagttcaagggcaccggcaacatggagctc
aagctcgaccgcgacctcgccgacaagcgcatcttccccgcgatcgacccggtctcctcg
ggcacgaggaacgaggacctgctcatcgatgccgagtaccagccgttcgtctggggcatc
cgtcgggtgctcgccaacatgaacaacaccgagcgcgcggcgaacgccctcatcaagggc
ctgcgcgagacggagtccaactccgagttcctcatcctcagcgccaagaaggcccagaag
accggctacatcgcctag
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