Thermophilibacter immobilis: INP52_06890
Help
Entry
INP52_06890 CDS
T07753
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tio
Thermophilibacter immobilis
Brite
KEGG Orthology (KO) [BR:
tio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tio03400
]
INP52_06890
Enzymes [BR:
tio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
INP52_06890
DNA repair and recombination proteins [BR:
tio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
INP52_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
MlaD
Motif
Other DBs
NCBI-ProteinID:
QOY60140
UniProt:
A0A7S7M7G4
LinkDB
All DBs
Position
complement(1534721..1538002)
Genome browser
AA seq
1093 aa
AA seq
DB search
MPLNLVRTTEEGIVAATVADTLRRALVARGRATLLVPSFAQALDAQRALAAAGGLSLGVT
VTTPAAWAAERWEVWGDGRRLVDDVSRDVLCAHVLSRAGGLEAAVRDNPGTASLLADLAR
AGMPWLMARTATPEAVSDAEASVVALVDAYADQLDACGLVEECSVMAALPQALDVAGAQV
DPLVLVGFDEMTRAARELVCGLAATHEVTFVARLDAGPASAEASRLADELCALARARGPQ
VVEGAADPEPVADPETSVAVRASELSDVLARLFLPAERLVEPTGALRLALPAGPSAEGEL
VAREVRALADAGAHDVILAAPDPRAAWNALSTRLAARGVSVRAQLSVPSGELEAGRAYLE
FARTVAQLDQLAQSWPAPAPAAGGVRVSLGDMSWWPPRSLSDFLLSDVSHLDAVRARRLD
AEWRSNRLLTPAAVLERLQSEKDVSFEVASATRELLRGRLGSAASKLLAPYVRGDKVASP
AAPQAIGALTAVLGVAKSLKELGLTANPQDSGAISLVELVAMADAALARVRVSLRPERAV
EGAACAVRLMDVASAARLAPGSTDALVLLGQTSTESAVPTTDDVRTALLASYGVEPLPHT
MDRVRARFSALVRVPRQTLVLERLLFGVDGRLAYPSVMMTELLACYGVAADARPSELADA
LGRENVVNRGEGLVRENASCAGVAPAWQARETPAPAGRISARERALVLPPPEGMPVDQGV
PLLSASQIETYLECPYKWFSLRRLRLRDADARFTGAELGTFVHRVLEVTHRELLARASER
AERGHLLAELRAQTPEALQDETYRAAVEGLLARAQADPTVRLPGSSTSDAEALEEARQIL
SEEFDAHLSHQYQLAGGRRPLPQALVAHSAQEHAQVQGLRRDLSTLLDFEGRMLVGYEPR
FFEWGFGRGGAEVSYAGVRIVGTVDRIDVDAHGQAVVIDYKHKSDAGFAREYDVFGPKGA
PAGAFALPRRVQSLIYGQVVRRAFPDLTVRAAVYLCTKGGHALAGAVDDDALEPVFGEEL
PSSRRALRVAVPRTASFGRTGEARGMQALLDACEEAIAGRIERLLAGDIEACPLEAGACS
YCPVLNCERRLRK
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgaaccttgtgcgcaccaccgaagagggaatcgtcgccgcgacggtcgcggac
accctgcgccgcgcgctcgtcgcgcgtggtcgcgccacgctcctcgtgccgtcgttcgca
caggcgctcgacgcccagcgcgcgctcgccgcggcgggcgggctctccctgggagtcacc
gtgacgacgcccgcggcctgggcggccgagcgctgggaggtctggggggacgggcgtcgc
ctggtggacgacgtctctcgcgacgtactctgcgcgcacgtgctctctcgcgcggggggg
ctggaagcagccgtgcgcgacaaccccggcacggcctcgcttctcgctgacctcgcgcgc
gcgggcatgccctggctcatggcccgcaccgcgaccccggaggcggtgagcgacgccgag
gccagcgtggtggcgctcgtcgacgcctatgcggatcagcttgacgcatgcggcctcgtc
gaggagtgctcggtcatggccgccctgccgcaggcgctcgacgtcgccggggcgcaggtg
gacccgctcgtgctcgtgggcttcgacgagatgacccgcgcggcgcgcgagctcgtgtgc
ggcctggccgcgacgcatgaggtcacgttcgtggcacgcctggacgcgggccccgcctcg
gccgaggcctcccgtctcgcggacgagctctgcgcactcgcgcgtgcgagggggccgcag
gtcgtggagggagccgcggatccggagccggtggcggacccagagacgtccgtcgccgtc
cgcgcatcagagctctcggacgtgctcgcgcggctcttcttgccggcggagcgcctcgtg
gagcccacgggggcgctgcggctcgccctgccggccggcccctcggccgagggcgagctc
gtggcccgcgaggtccgcgcgctcgcggacgcgggcgcgcacgacgtgatactcgcggca
cccgacccgcgcgccgcctggaacgctctctccacgcgtctcgccgcgcgcggcgtgtcc
gtccgcgcccagctgagcgtgccctccggcgagctcgaggcggggcgcgcctatctcgag
ttcgcgcgcacggtggcccagctcgaccagctcgcccagagctggcccgcgcccgctccg
gcggcagggggcgtgcgggtgagcctgggggacatgtcctggtggccccctcgctccctc
tcggacttcctgctgagcgacgtctcccacctggacgcggttcgcgcgcgcaggctcgac
gccgagtggcgctcgaaccgcctgctcacgcccgccgcggtgctcgagcgcctccagtcc
gagaaggacgtctccttcgaggtcgcctccgccacgcgcgagcttctgcgcgggcggctg
gggtcggccgcctctaagctcctggccccctacgtacggggggacaaggtcgcgagcccc
gcggccccccaggcgatcggtgccctcacggccgtgctcggcgtggccaagagcctgaag
gagctcggcctcacggccaacccgcaggactcgggggccatttcgctcgtcgagctcgtg
gccatggccgacgcggcgctcgcgcgcgtgcgcgtgagcctgcgccccgagcgggcggtg
gagggagccgcctgcgcggtgcgcctcatggacgtggcctcggcggctcgcctggccccg
ggctcgaccgacgccctcgtgctcctgggccagacctccacggagtcggccgtcccgact
accgacgacgtgcgcacggcgttgctcgcctcctatggcgtggagccgcttccgcacacc
atggaccgggtccgcgcgcgcttctcggcgctcgtgcgcgtcccgcggcagacgctcgtg
ctcgagcgactgctctttggcgtggacggcaggctcgcgtatccctccgtgatgatgacg
gagctcctcgcgtgctacggcgtcgcggccgacgcgcgtccgtcagagctcgcggacgcg
ctgggccgggaaaacgtggtcaacaggggggagggcctcgtgcgcgagaacgcctcgtgc
gcgggcgtcgcccccgcctggcaggcacgtgagacgcccgcgcccgccgggaggatctcc
gcgcgggagcgcgccctcgtgctgcccccgcccgagggcatgccggtggatcagggggtt
cctctgctctcggcgtcccagatcgagacctacctcgagtgcccgtacaagtggttcagc
ctgcgccgcctgaggctgcgcgacgccgacgcccgcttcactggtgccgagctgggcacc
ttcgtccaccgcgtcctcgaggtcacgcaccgcgagctccttgcccgcgcctccgagcgc
gccgagaggggccacctgctcgccgagctgcgcgcccagacccctgaggccctacaggac
gagacgtaccgcgccgcggtcgaggggcttctcgcccgcgcgcaggctgaccccaccgtg
cgcctgccgggctcgtccacctcagacgcggaggcgctcgaggaggcccgccagatcctc
tccgaggagttcgacgcgcacctctcccatcagtaccagctcgcgggcggtcgccgcccg
ctcccgcaggcactcgtcgcgcacagcgcgcaggagcacgctcaggtccaggggctgcgt
cgcgacctctcgacgctcctggactttgagggccgcatgctcgtgggctacgagccgcgc
ttcttcgagtgggggttcgggcgcggcggggccgaggtgagctatgcgggcgtgcggatc
gtgggcaccgtcgaccgcatagacgtggacgcccacgggcaggccgtcgtcatcgactac
aagcataagtccgatgccggcttcgcgcgcgagtacgacgtctttggtcccaagggcgcc
cccgcgggcgcgttcgcgctgccccggcgcgtgcagtcgctcatctacggccaggtcgtg
cgacgcgccttcccggacctcacggtgcgcgcggcggtctacctctgcacgaagggcggc
cacgccctcgccggtgccgtggacgacgacgcgctcgagcccgtcttcggcgaggagctc
ccctcgtctcgccgcgccctgcgcgtcgcggttcctcgcacggccagcttcgggcgcacg
ggggaggcccgcggcatgcaggccctgctcgacgcctgcgaggaggccatcgccggacgc
atcgagcgcctgctcgccggcgacatcgaggcgtgccccctggaagcgggcgcctgctcg
tactgcccggtcctgaactgcgagaggaggctccggaagtga
DBGET
integrated database retrieval system
