Thermophilibacter immobilis: INP52_08845
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Entry
INP52_08845 CDS
T07753
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tio
Thermophilibacter immobilis
Pathway
tio03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tio00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
INP52_08845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tio03021
]
INP52_08845
03400 DNA repair and recombination proteins [BR:
tio03400
]
INP52_08845
Enzymes [BR:
tio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
INP52_08845
Transcription machinery [BR:
tio03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
INP52_08845
DNA repair and recombination proteins [BR:
tio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
INP52_08845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_A_CTD
HHH_5
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QOY60497
UniProt:
A0A7S7RUJ1
LinkDB
All DBs
Position
complement(1949498..1953952)
Genome browser
AA seq
1484 aa
AA seq
DB search
MADFDTTDFDAIKISLASADRIRSWSCGEVKKPETINYRTLKPEKDGLFCEKIFGPVKDW
ECACGKYKGIRFRGIVCERCGVEVTTAKVRRERMGHIELAAPVSHIWYFKSPASFPLARL
LDIKSKDLEKVLYFASYIITSVDTEAREADADDLREELAADLEELDAERDDQIERLKEQG
EVPEGEFGDIEPLSADEIRAGIADLEEEYEEEKALRRDAYEKFMQLEERELISDDGLFSE
LRRYYGIYFKGGMGAEAVRELLRGIDLEAEATTLRAIISSDESQKQKREKAVKRLEIVDA
FLKGGNDPANMILDVVPVIPPDLRPMVQLDGGRFAASDLNDLYRRVINRNNRLKRLLDLD
APAIIVNNEKRMLQESVDALFDNGRRGRPVTGRGGRPLKSLAEALKGKQGRFRQNLLGKR
VDYSGRSVIVVDPNLKLHQCGLPSQMALELFKPFVMRRLVELGKVENIKGAKRAIDRQLP
AVWDVLDEVIQDRLVLLNRAPTLHRLSIQAFEPILVEGKAIHLHPLVCAPFNADFDGDQM
SVHVPLSTQAQTEARVLMLSSNNLRSPASGKVMTVPSQDMVFGVYFLTTEKGEPSEEMRI
FSDFEDAQLAVDMKEEVGLQERVIVRVSTADANVVEGDRKIFRVLTARGTSEDYDVTKGA
ARFETTVGRIIFNRQCLPADYPFINYKMVKSDIGTLVNDCCDRYDTSAVEPILDAIKAIG
FHYATVAGLTVSVWDAVIPDDKPQLLEEAQGRVDEINEYYEDGFLSERERHIEVVNAWTE
CTDLLGTEMLAGFAEDNPIYMMADSGARGSKTQLRQLAGMRGLMADMSGDTIDLPIKANF
REGLQPLEYFISTYGARKGLVDTASHTSDSGYLTRRLVDVAQDVIVREEDCGTDEAVTYA
LVKPGETEVDVDLVGRCALNDIVDPVTGEVLIAGGTYLESKDDLDRLVAHGLKTIQLRAL
LTCKSKHGICQKCYGWDLSTRRPVNIGTAVGIIAAQSIGEPGTQLTMRTIHSGGVAGADD
ITQGLPTVARMFDVVGNVNEKILGREADLAPVSGLLRVIPEQTEYLLRICDTEDTSRIIE
EWRVPASVRFMPGVEDSVEVRAGDQITRGFVNFRKLRKLTDIESTMHTFVESVKDVYTSQ
GVELNDKHIEVIARQMLRRVQVTNPGDSQYLLGQYVDRYVFAETVRNVALAGGTPPEAEP
VILGTLKVASSIDSWLSSASFIRTAGVLTEAAIEGDVDHLLDLKSNVIVGKQIPAGTGLA
AYHNVAPTYHGTKIDGPTSPLAKGLPEWAPDDLKGIEEQLPKQLDWVGDDYGFGGVYSKN
GRTLSSEDAKLYLFDDLGVSQRWTNKFSEVGIETVGDLIGKTEDDLLRIDGIGAKAIEEL
RDGLEARGLLYILEPDDDEADSEDLSQLLNMVFSPDADADIMLGTAAPSKHHFEDDELIG
GAEEDEESGTPEVINEDLGSLDDLLSQVVRQESEDSEGETDSEE
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatttcgacaccactgatttcgacgcgatcaagatctccctggcctccgccgac
cgcatccgcagctggtcgtgcggcgaggtcaagaagcccgagaccatcaactaccgtacc
ctcaagcccgagaaggacggtctgttctgcgagaagatcttcgggcccgtcaaggactgg
gagtgcgcctgcggcaagtacaagggcatccgcttccgcggcatcgtctgcgagcgctgc
ggcgtggaggtcacgacggccaaggttcgccgcgagcgcatgggccacatcgagctcgcc
gctcccgtgagccacatctggtacttcaagagccccgcgagcttcccgctcgcgcgcctg
ctcgacatcaagagcaaggacctcgagaaggtcctgtacttcgccagctacatcatcacg
agcgtcgacaccgaggcccgcgaggccgatgccgacgacctgcgcgaggagcttgccgcc
gacctcgaggagctggacgccgagcgcgacgaccagatcgagcgcctcaaggagcagggc
gaggttcccgagggggagttcggcgacatcgagcccctctccgccgacgagattcgcgcc
ggcatcgccgacctcgaggaggagtacgaggaggagaaggcgctgcgtcgtgacgcctac
gagaagttcatgcagctcgaggagcgcgagctcatctccgacgatggcctcttctcggag
ctcaggcgctactacggcatctacttcaagggcggcatgggcgccgaggccgtgcgtgag
ctcctgcgcggcatcgacttggaggccgaggccacgaccctgcgcgccatcatctcctcc
gacgagtcccagaagcagaagcgcgagaaggccgtcaagcgcctggagatcgtcgacgcc
ttcctcaagggcggaaacgacccggccaacatgattctcgacgtcgtgccggtcatcccc
cccgacctgcgcccgatggtccagctcgacggcggccgctttgctgcgtccgacctgaac
gacctgtaccgccgcgtgatcaaccgcaacaaccgcctgaagcgtctgctcgacctggac
gctcccgcgatcatcgtcaacaacgagaagcgcatgctccaggagtccgtcgacgccctc
tttgacaacggccgtcgtggacgtcccgtcaccggccgtggcggacgcccgctgaagtcg
ctcgccgaggcgctcaagggcaagcagggccgcttccgccagaaccttctgggcaagcgc
gtcgactactccggtcgctcggtcatcgtggtcgacccgaacctcaagctccaccagtgc
ggccttccgtcgcagatggcgcttgagctcttcaagccgttcgtgatgcgccgcctcgtc
gagctgggcaaggtcgagaacatcaagggcgccaagcgcgcgatcgaccggcagctgccg
gccgtgtgggacgtgctcgacgaggtcatccaggaccgcctggtgcttctcaatcgcgcc
cccaccctgcaccgcctctccatccaggccttcgagccgatcctggtcgagggcaaggcc
atccacctgcacccgctcgtgtgtgcccccttcaacgccgacttcgacggcgatcagatg
tcggttcacgtgcccctgtccacgcaggcccagaccgaggcccgcgtcctcatgctctcg
tccaacaacctgcgcagccccgcgtccggcaaggtcatgaccgtgccgtcccaggacatg
gtctttggtgtgtacttcctcacgaccgagaagggcgagccgagcgaggagatgcgaatc
ttctccgacttcgaggacgcccagctcgccgttgacatgaaggaggaggtcggcctgcag
gagcgcgtcatcgtgcgcgtgtccaccgcagatgccaacgtcgtcgagggcgaccgcaag
atctttcgcgtgctcacggcccgcggtacctccgaggactacgacgtcaccaagggtgcc
gcgcgcttcgagaccacggtcggccgcatcatcttcaaccgccagtgcctgcctgccgac
taccccttcatcaactacaagatggtgaagagcgacattggcaccctggtcaacgactgc
tgcgaccgctacgacacgtccgcggtcgagcccatcttggatgccatcaaggcgatcggc
ttccactacgccaccgtcgcgggtctgaccgtctccgtgtgggacgccgtcatccccgac
gacaagccgcagctgctcgaggaggcacagggccgcgtcgacgagatcaatgagtattac
gaggacggcttcctctccgagcgcgagcgccacatcgaggtcgtcaacgcctggaccgag
tgcaccgaccttctgggcaccgagatgctcgcgggctttgccgaggacaaccccatctac
atgatggccgactccggcgcccgtggctccaagacgcagctgcgccagctcgcaggcatg
cgcggcctcatggccgacatgtccggagacacgatcgacctgcccatcaaggccaacttc
cgcgagggcctgcagccgcttgagtacttcatctccacctacggcgcccgcaagggtctg
gtcgacaccgcgtcgcacacctccgactccggctacctgacccgtcgtctcgtcgacgtg
gcccaggacgtcattgtgcgcgaggaggactgcggcaccgacgaggccgtcacctatgcg
ctcgtcaagccgggcgagaccgaggtcgacgtcgacctcgtgggccgctgcgccctcaac
gacatcgtcgaccccgtcacgggcgaggtccttatcgccgggggtacctacctcgagtcc
aaggacgacctggatcgactcgtcgcccacgggctcaagacgattcagctgcgtgccctt
ctcacctgcaagtccaagcacggcatctgccagaagtgctacggctgggacctctccacg
cgccgtccggtcaacatcggcacggcggtgggcatcatcgccgcccagtctatcggcgag
ccgggcacccagctcacgatgcgtaccattcactccggcggtgtcgcgggcgcggacgac
atcacgcagggcctccccacggtcgcccgcatgttcgacgtcgtcggcaacgtcaacgag
aagatcttaggccgcgaggccgatctcgccccggtgagcggccttttgcgcgtcatcccc
gagcagaccgagtacctgctgcgcatttgcgacaccgaggacacgagccgcatcatcgag
gagtggcgcgtccccgcgtccgtccgcttcatgcctggcgtcgaggacagcgtcgaggtt
cgcgcgggcgatcagatcacgcgcggcttcgtcaactttcgcaagctccgcaagctcacg
gacatcgagtcgacgatgcacacgttcgtggagtccgtcaaggacgtctatacctcccag
ggcgtcgagctcaacgacaagcacatcgaggtcatcgcccgtcagatgctccgtcgcgtc
caggtgaccaaccccggcgactcccagtacctgctgggccagtacgtcgaccgctacgtc
ttcgccgagaccgtgcgcaacgtggcgctcgccggcggaaccccgccggaggccgagccc
gtcatcctgggcacgctcaaggtggccagctccatcgactcctggctctccagcgcgtcg
ttcatccgcacggcgggcgtcctcaccgaggccgccatcgagggcgacgtcgaccacctg
ctcgacctcaagtccaacgtcatcgtgggcaagcagattcccgctggtaccggccttgcc
gcctaccacaacgtggcacccacctaccacggcaccaagatcgacggtcccacctcgcct
ctggccaagggcctgcccgagtgggcgcccgatgacctcaagggcatcgaggagcagctc
cccaagcagctcgactgggtcggcgacgactacggctttggcggcgtgtactccaagaac
ggccgcaccctctccagcgaggacgccaagctctatctcttcgacgacctcggcgtctcg
cagcgctggaccaacaagttcagcgaggtgggcatcgagaccgtgggcgacctcattggc
aagaccgaggatgacctgctacgcatcgacgggatcggtgccaaggccatcgaggagctc
cgcgacggcctcgaggcccgcggcctgctctacattctggagcctgatgacgacgaggcg
gacagcgaggatctctcccagctcttgaacatggtcttctcccctgacgcggatgccgac
atcatgctcggcacggcggccccctccaagcaccacttcgaggacgatgagcttatcggc
ggtgccgaggaggacgaagagtccgggactcccgaggtcataaacgaggaccttggctcc
cttgacgatctgctctcccaggtcgtacgccaggagtccgaggattccgagggcgagacc
gacagcgaggagtag
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