Tissierella sp. Yu-01: P3962_01035
Help
Entry
P3962_01035 CDS
T08969
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P3962_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tis03019
]
P3962_01035
Enzymes [BR:
tis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P3962_01035
Messenger RNA biogenesis [BR:
tis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P3962_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
AAA_22
S1CSD-TOTE-1
CMS1
Motif
Other DBs
NCBI-ProteinID:
WFA09186
LinkDB
All DBs
Position
204021..205334
Genome browser
AA seq
437 aa
AA seq
DB search
MSFKELKLIEPIQRSLLAEGYSKPTPIQEKAIPALLEGKDLLGCAQTGTGKTAAFAIPIL
QQLSTERRSSKERRLIKALIVAPTRELAIQISDSFKAYGRNLGLKTLVIYGGVTQHPQTR
DLASGVDILVATPGRLLDLINQRFISLKNTKYFVLDEADLMLDMGMLKDVRKIITYLPKD
RQTMFFSATMPTEIGELANSILNNPIRIDITPVSSTVDIIDQEVYFVDKVNKINLLIHIL
KDKKIDSALVFSRTKHGANKIVSSLEKIGLAAQAIHGNKSQNARQLALNNFKERKTRILI
ATDIAARGIDIEELSHVINFDLPEVPETYVHRIGRTGRAGLGGKAISFCDYEEKPLLRSI
QKLISKTITEVTDHPYPLVDTTIKPKGRSVRGAYASNSSRSNTPKSKDTKTGKIRREKRA
NEPKKKTNGKNVHWTSR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatttaaagaattaaaattaattgagccaattcagagatctttactagctgaagga
tactctaagcctacccctattcaagagaaagcaataccagcacttttagaagggaaggat
ttattaggatgtgctcaaacaggtacagggaaaactgcggcttttgcaattcctatatta
caacaactgtctacagaacgacgatcatcaaaagaacgtagactaataaaggcattaata
gtggcaccaacaagggaattagctattcaaatttcggatagttttaaagcctatggaaga
aatctaggattaaagactttagttatatatggaggagtcacccagcatccacaaactagg
gatttagctagtggagtagatatattagtagctacacctggtagattgctagatttaata
aatcaacgttttataagtttgaaaaacacaaagtattttgtattagatgaagctgatctt
atgttagatatgggtatgttaaaggatgttagaaaaatcattacttatcttcctaaggat
aggcaaacaatgttcttttcagcaacaatgccaactgaaataggtgaattagctaattca
atattaaataatccaattagaatagatattacaccagtatcatctactgttgacattata
gatcaagaagtatactttgttgataaagtaaataagattaatttactcattcacattttg
aaggataaaaaaatagattccgctctagtattttccaggactaagcatggtgcaaataaa
attgttagttccttagaaaaaataggacttgctgctcaagccatacatggtaacaaatct
caaaatgctagacagcttgccttgaataattttaaggaaaggaaaactagaattttaata
gctactgatatagctgcaagaggaatagatatcgaagagctatcacatgtaataaatttt
gatctaccagaggttccagaaacctatgtacacagaataggcagaacaggcagagcaggt
ctcggtggaaaggcaatatccttttgtgattatgaagaaaagccattacttcgatcgatt
caaaagttaatatctaaaactatcacagaagtaacagaccatccttatcctttagtagat
acaactattaagccaaagggaaggtcagtcagaggagcttatgcttctaattcatctagg
tcaaatactcctaagagtaaggatactaaaacgggtaagatcaggagagaaaaaagagca
aatgaaccaaagaaaaagacaaatgggaaaaatgttcattggactagtagataa
DBGET
integrated database retrieval system
