Tissierella sp. Yu-01: P3962_03990
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Entry
P3962_03990 CDS
T08969
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
P3962_03990 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tis03400
]
P3962_03990 (mutS)
DNA repair and recombination proteins [BR:
tis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
P3962_03990 (mutS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_27
AAA_14
Motif
Other DBs
NCBI-ProteinID:
WFA09729
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Position
764103..766718
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AA seq
871 aa
AA seq
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MENLTPMMKQYMEIKEKYKDSILFFRLGDFYEMFFEDAKIASKELEITLTQRDCGQEEKA
PMCGIPHHVSDTYISKLVEKGYKVAICDQLENPALAKGIVKRDVVRIITPGTITDANMLD
DKSNNFLVSIYFDDFGIGITYVDNSTGEMYTTEFQNDEDSCYRFIIDELGKTTPSEIICN
NKFTLNKRYMKIIKNKINPYINTYENIKEVDEKLKSYIYNLYKIDDLKKIGINEKIYAII
STSKLIEYLYDTQKNSLDHINTINYYEPANYMVMDINTRTNLEINETIRSKEKKGALIGI
LDKTQTAMGGRLLKKWLEQPLLDMRQIKGRLEVVEFFTNNLMIMDDLRALLRDIYDIERL
SSKITNSNCNGRDFLSLKNSIKVLPEIKEILNKCDNEQLNKLGKKIDDLHDIYTLIESAI
DDEAPITLKEGGLIKTGYNKELDELRDSSFKGKEWLSNLELQERNKTGIKNLKIGYNRIY
GYYLEVTKSNLNLVPKYFIRKQTLANSERYYTEELKNMEAKILGSEEKSLDMEYEIFLTI
RNSIKMEIKRLQEVSKYIATLDVLCSFGFVANNNNYVKPELNIKGVIEIDEGRHPVVEAT
IDNNLFIPNDTYLDTGQNMVQIITGPNMAGKSTYMRQVAIITLLAQIGSFVPAKKANIGI
VDRIFTRIGASDNLSQGESTFMVEMNEVSNIIKSATSKSLIILDEVGRGTSTYDGLSIAW
AVVEFILENISAKTLFATHYHELTQLEEKFKGIVNLTILAEEKGDDIVFLRKIVKGSTNR
SYGIQVAKLAGINKEIIDRANEILTQIEGSHEINLNNNSKDISKQLNLLDYKKDYFLDRI
KNIDIHNLTPIEALNTLNNLVEDAKGLKERS
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctaacaccaatgatgaaacaatacatggaaataaaagaaaagtataaggat
tctatacttttctttaggttgggtgacttttatgaaatgttctttgaagatgctaaaatc
gcttctaaggaattagaaattacacttacacaaagagactgcggacaggaagaaaaggct
cctatgtgcggtatacctcatcatgtatctgatacttatatttcaaaattggttgaaaag
ggttataaggtagcaatttgcgatcaacttgaaaacccagcattggccaaaggtattgta
aaaagagatgttgttagaattataactccaggaactataactgacgctaatatgctggat
gataaatcaaataattttctagtatcaatatattttgatgattttggcatcggaataaca
tatgtagataattcaactggtgagatgtacaccactgagtttcagaacgatgaagatagt
tgttataggttcattattgatgaattaggaaaaacaacaccatcagaaattatatgcaat
aataaattcactttaaacaaaaggtatatgaaaataattaaaaataagataaacccctat
atcaatacttatgagaacataaaagaagtagatgagaaactaaaatcctacatttataat
ctttataagattgatgatttaaaaaagattggtattaatgaaaaaatttatgctattatt
tcaacttcaaaattaattgaatatctatacgatactcaaaaaaattctctagatcatatc
aatacaattaactactacgaaccagcaaattatatggtaatggacataaatacaagaact
aatttggagattaatgaaaccattaggtctaaagaaaaaaaaggtgctttaataggaatt
ctagataaaacacaaactgccatgggtggtaggttgctaaaaaaatggttagagcaacct
ttattagatatgagacaaataaagggaagacttgaagtcgtggagttttttacaaataat
ttaatgataatggacgatttaagagctttattaagagatatatatgatatagagcgacta
tctagcaagatcactaattcaaactgtaatggtagagattttttatctttaaagaattca
attaaggttctacccgagataaaagaaatactaaataaatgcgacaatgaacagcttaac
aaattgggtaaaaaaatagatgatttacatgatatatatacattaattgaatcagctatt
gatgatgaagcgcctattacacttaaagaaggcggtcttataaaaacaggttataataaa
gaattagatgaactaagagatagtagttttaagggtaaggaatggttaagtaatcttgag
ctccaagagagaaataagactggtattaaaaaccttaaaataggatataaccgtatatat
ggttactatcttgaagttactaaatcaaatttaaatttagtacctaagtattttataagg
aagcaaactttagcaaattctgaaagatattatacagaagaacttaagaacatggaagcg
aaaattctaggttctgaagaaaaatctctggatatggaatatgaaatatttctaactata
agaaatagcattaaaatggaaattaaaaggttacaagaggttagcaaatatatagccaca
ttagacgtattgtgcagctttggttttgtagctaataataataattatgtgaaacctgaa
ttaaatattaaaggtgtaattgaaatagatgaaggaagacatcctgtagtagaggctact
attgataacaatctatttattcctaatgatacttatctagatacaggtcaaaacatggtt
caaataataaccggacccaatatggctggtaaatcaacgtacatgagacaagtggcaata
atcacattgctagctcaaataggttcgtttgtccctgcaaaaaaggcgaatataggcata
gtggatagaatatttacaagaataggagcttctgataatctttctcaaggcgaaagtacc
tttatggtagaaatgaatgaagtgtctaacataattaaatccgctacttctaaaagcctt
attattttagatgaggtaggaagagggacaagtacatatgatgggcttagtatagcatgg
gcagtagtagaatttatacttgaaaatataagtgctaagacattatttgcaactcattat
catgaattaactcaattagaagaaaagtttaaaggtatagtaaatttaacaatattagct
gaagaaaaaggcgatgatatagtatttctccgaaaaatagtaaagggtagtactaataga
agttatggtatacaggttgcaaaattagcaggcattaacaaagaaattattgatagggca
aatgaaatactaacacaaatcgaaggtagtcatgaaataaatcttaacaataattctaag
gacatttcaaaacaacttaatctattggattataagaaagattactttttagatagaata
aagaatattgacatacacaatctaacaccaattgaagcacttaataccttgaataattta
gttgaagatgcaaagggactaaaggagagatcctag
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