Tissierella sp. Yu-01: P3962_04050
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Entry
P3962_04050 CDS
T08969
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P3962_04050 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tis03019
]
P3962_04050 (rny)
Messenger RNA biogenesis [BR:
tis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P3962_04050 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4834
ZapG-like
UPF0154
Motif
Other DBs
NCBI-ProteinID:
WFA09741
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All DBs
Position
complement(776458..778005)
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AA seq
515 aa
AA seq
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MEVLIIDKLIFIILGLIIGIIAGYFIRRYIGEGKIKNAEELAKKITEEAEKNGEARKKEL
LLEAKEEIHKSRGEAEREIRERRNEVQKLERRVLHKEETLDRKAESIEKKEEQLAKKSKY
LDEKEESINELYERQTLELERLSGLTSEEAKELLLNDIRKEISHESAIMIKDMESKAKEE
ADKKSREIITTAIQRCAADHVAETTVTVVALPNDEMKGRIIGREGRNIRTLETLTGIDLI
IDDTPEAVVLSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAKKEVENTIREEGEK
AAFDTGVHGLHPEIIKLLGRLKYRTSYGQNVLKHSIEVSQLAGIMASELGADVKIAMRAG
LLHDLGKAVDHEIEGPHVEIGADIARKYKESKEVVHGIAAHHGDIEPQTVEAVLVQASDA
ISAARPGARRESLESYIRRLEKLEGIANSFEGVERSFAIQAGREIRILVKPEEISESQIV
HTARDIVKKIESELDYPGQIKVNVIRETRAIEYAK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgttaattattgacaaattgatttttataattcttggcttaattattggaatt
atcgctggttatttcattcgaagatatataggcgaagggaaaataaaaaatgctgaagag
ttagcaaagaaaattactgaagaagctgaaaaaaatggagaagcacgaaaaaaagagctt
ttacttgaagctaaagaagaaattcataagtctagaggagaagctgaaagagaaataaga
gaacgaagaaatgaggttcagaaacttgaaagaagagtacttcataaagaagaaacactt
gatagaaaagctgaatccattgagaaaaaagaagaacaattagcaaaaaagagcaagtat
ttagatgaaaaagaagaatcaatcaatgaattatatgagagacaaaccttagaacttgaa
agattatcaggattgacatctgaagaagcaaaagagctattattaaatgacattaggaaa
gaaatatctcatgaatctgcaattatgattaaggatatggaatcaaaagctaaagaagaa
gcggataagaaatccagagaaataataactaccgcaattcaaagatgcgcagctgatcat
gttgctgaaactacagttacagttgtggcattgccaaatgatgaaatgaaaggtcgaatt
attggacgtgaaggtagaaatataagaacattagaaaccttaaccggtattgatttgatt
attgatgatactcctgaagctgtagtattatccggatttgaccctataagaagagaagta
gctagaatagctttagaaaagctaattgtagatggtagaattcaccctgctagaattgaa
gaaatggttgaaaaggctaaaaaagaagttgaaaatacaattcgtgaagagggtgaaaaa
gctgcttttgacactggagtacatggattgcatccagagataataaagctattaggtaga
ttaaaatatagaactagttatggacagaatgttctaaaacattctattgaagtttcacaa
ttagcaggaattatggcttctgagcttggagctgatgttaagattgctatgagagctgga
ctattacatgatcttggtaaagctgttgatcatgaaattgaaggaccacatgttgaaatt
ggtgccgatatagctcgtaaatataaagagtctaaggaagttgtgcatggaattgctgca
catcatggagatattgagccacaaacagttgaggcagtgcttgtacaggcatctgatgct
atttctgctgctagaccaggtgctaggagagaaagtcttgaatcctacattagacgtcta
gaaaagttagaaggaattgcaaattcttttgaaggagtagaaagatcctttgctatacaa
gctggtagagagattagaatattagtaaagccagaagagataagtgaaagtcaaatagtt
catactgccagggatatagttaagaaaattgaatctgaattagactatccaggtcaaatt
aaagtaaatgttattcgagaaactcgagctattgaatatgcaaaataa
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