Tissierella sp. Yu-01: P3962_04140
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Entry
P3962_04140 CDS
T08969
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tis
Tissierella sp. Yu-01
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tis03016
]
P3962_04140 (truB)
Enzymes [BR:
tis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
P3962_04140 (truB)
Transfer RNA biogenesis [BR:
tis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
P3962_04140 (truB)
Prokaryotic type
P3962_04140 (truB)
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
RRM_DEAH11
TruB-C_2
SidF
Motif
Other DBs
NCBI-ProteinID:
WFA09759
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All DBs
Position
complement(795622..796515)
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AA seq
297 aa
AA seq
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MDGVINLFKPRGMTSHDAVYVIRKIFKTKKVGHTGTLDPNATGVLPICIGKATRISEYLL
GVDKEYIGELTLGFSTDTQDSDGVIINSSKKEVTEKEINDSFNKFKGLIYQIPPMYSALK
VDGKKLYELAREGKTIERAPREVNIKESKILNNYNNKEIIFYTKCSRGTYIRTFCDDIGN
DLGTYGYMSYLMRVGVGNFKIENSISIEALRNMCERELYSVLTPIDIAISHMEKINLDSD
YYKKIINGALVKLDNEYSSLIDLDIRVYCKDKFIGIGKINQFNNENYLKMNKVFIGE
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggacggagttataaacttatttaaaccaagaggaatgacatctcatgatgcagtttat
gttattaggaagatatttaaaacaaagaaggttggacatactggtacattagatccaaat
gctactggtgtcctaccaatatgtattggcaaagcaacaagaatttctgaatatttatta
ggtgttgataaagagtatattggagaattgactcttggattttcaacggacacacaggat
agtgatggtgttattatcaattcctcaaagaaagaagtaactgaaaaggagataaatgat
tcctttaataaatttaaaggtctaatttatcaaattcctccaatgtattcggctctaaaa
gttgatggtaaaaaattatatgaattagctagagaaggaaaaactatagagcgagcacca
agagaggttaatattaaggaatcaaaaatattaaataactataataataaagaaataata
ttttatacaaaatgttcaaggggaacttatattagaacattttgtgacgatattgggaat
gatttaggtacatatggttatatgtcttacttaatgagagtaggcgtaggtaattttaaa
attgaaaattctataagcattgaagcacttagaaatatgtgtgaaagagaattatatagt
gttttaactcctatagacattgcaataagccatatggagaaaattaatctagattcagat
tattataagaagataataaatggtgctttagtaaagttagataatgaatattcaagttta
attgatttagatataagagtttattgtaaagataaatttataggaataggtaagattaat
caatttaataatgaaaattatctaaagatgaataaagtttttataggtgagtaa
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