Tissierella sp. Yu-01: P3962_06770
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Entry
P3962_06770 CDS
T08969
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03420
Nucleotide excision repair
tis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P3962_06770
03430 Mismatch repair
P3962_06770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tis03400
]
P3962_06770
Enzymes [BR:
tis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P3962_06770
DNA repair and recombination proteins [BR:
tis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P3962_06770
MMR (mismatch excision repair)
Other MMR factors
P3962_06770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WFA10247
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Position
1343948..1345810
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AA seq
620 aa
AA seq
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MILSVEQENAINHIDGPALVLAVPGAGKTTVLINRTKNLIDTHGVSPERILSITFSKASA
LDMKNRFTRSFPEYDTSLVKFSTIHAFCFGLIREYSYINNVQYKLIENDDNTLNKYNLLK
QIHLELNKEYITEEKLESLLNSIGYIKNMMITPEEYMKSSKVDIANFIDIYSIYESYKRK
NLLLDFDDMLTISLEILSKNKSLLHKYRHKYDYFQLDEGQDTSKIQLTIIKLLASPKNNL
FIVADDDQSIYGFRGAFPKGLLEFTKEYKNGKLYYMEKNYRSSKNIVSICNKFIKTNKFR
YSKEISTDNGYLEPINIVKVKTVSDQYKFLLEDLKKHNLANSCILYRNNLSSVGLMEILE
KNNINFYMRDSKLRFFNHWMIQDITNFMNFSYDTSNMEIYETLYYKAKGYIAKKHINYAK
TLDYRSSVFDRIMEYPGLSEYYKRTLRELKLDFKKLSKLKPYESILYIENDLEYSNYLRE
NSMKFGYTYENLMNILFYLKLIAKSTVDLSDFIGRLNHLQYLSTNSKDNKDTITLSTIHS
AKGLEYENVYIVDLVDGDFPNISSIEAFEKDNVEPLEEERRLFYVGMTRAKKHLTLITTK
YIGEKLLEPSRFITELQQQA
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
ttgatattaagtgttgagcaagaaaatgcaattaatcatattgatggacccgctcttgtt
cttgcggtacctggtgctggaaaaacaacagtactaataaatagaacaaaaaatttaata
gatacacatggtgtaagtcctgaaagaattctatctattacatttagtaaagcctcagct
ttagacatgaaaaatagatttactagaagttttccagagtatgatacttctttagtcaaa
ttttcaactatccatgcattttgttttggtcttattagagaatactcctatattaacaat
gtacaatataaattaatagagaacgatgataatacattgaataagtataatttattaaag
caaattcatttagaattgaataaagaatatattacagaagagaaacttgaatcattatta
aattcaataggctatattaagaatatgatgataacaccagaggaatatatgaaaagtagt
aaagttgacatagctaactttattgatatatatagtatttatgaatcctacaaaagaaaa
aacctgttgttagattttgacgatatgctaactatttccttggaaatattgtctaaaaat
aaatctctattacataaatataggcataaatatgattattttcagcttgatgaaggacaa
gatacttccaagatacaactgacaattataaagttgcttgcaagtcctaaaaataatttg
tttatagtagctgatgatgatcagtcaatttatgggtttagaggagcattcccaaaagga
ctattggaatttacaaaagagtataaaaatggaaaactatattatatggagaaaaactat
cgttcaagtaaaaatattgtatcaatatgtaataaatttataaagacaaataaatttaga
tacagtaaggagatatcaactgataatggatatctggaaccaataaatattgtaaaagta
aaaactgtatcagatcaatataaatttcttttagaggatcttaagaaacataatctagct
aattcatgtattttatatagaaataatctttcctctgtaggactaatggagatcctagaa
aagaataatatcaatttctatatgagagattctaaactaagattttttaatcattggatg
atacaggatataactaactttatgaatttttcatatgatacatcgaatatggaaatatat
gaaactctttattataaagcaaaaggctatatagctaagaaacatataaattatgctaaa
accctggattacagaagttctgttttcgataggataatggagtatcctggattaagcgag
tattataaaagaaccttaagagagttaaagttggatttcaaaaaattatctaagctaaaa
ccctatgaatccattctttatattgaaaatgaccttgaatatagtaattatctcagagag
aattctatgaaatttggatatacctatgagaatctaatgaatattttattttacttaaaa
ttaatagcaaaatccactgtagatttgtctgactttattggaagattaaatcacttacag
tatttaagtacaaattcaaaagataataaagatactataacactgtcaacaatccattcg
gctaagggtcttgaatacgaaaacgtatatatagttgacttagttgatggcgactttcca
aatatatctagcattgaggcatttgaaaaggataatgtagaaccccttgaagaagaaaga
agattgttttatgtaggtatgacaagggcaaaaaagcacttaactctaataactaccaaa
tatataggggaaaaattattagaaccttctagatttataactgaactacagcagcaagcc
taa
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