Tissierella sp. Yu-01: P3962_07690
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Entry
P3962_07690 CDS
T08969
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P3962_07690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tis03021
]
P3962_07690
03400 DNA repair and recombination proteins [BR:
tis03400
]
P3962_07690
Enzymes [BR:
tis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P3962_07690
Transcription machinery [BR:
tis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P3962_07690
DNA repair and recombination proteins [BR:
tis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P3962_07690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SpoIVA_ATPase
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WFA07629
LinkDB
All DBs
Position
complement(1490329..1491276)
Genome browser
AA seq
315 aa
AA seq
DB search
MIEIEKPRIEILELSEDNSYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVSSIKIQG
VLHEFSTIPGVLEDVPEIILNIKGIAAKMYSDEPVTLLIDIEGPKDVTAGDIITGLDVEI
VNKDHHIATVNEDGRLYIEMELVKGRGYVVSEKNKREGQPVGVIPVDSSFTPVSKVNYNV
ENTRVGNITDYDKLVLEVWTNGTLDADEATSLGAKILTEHLNLFIGLTEHVSNVEIMVEK
EEDKKEKVLEMTVEELDLSVRSYNCLKRASINTVEELTQKSEEEMMKVRNLGKKSLEEVQ
RKLAELGLGLRKSDE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaaccgagaatagaaatcctagaattaagcgaagacaatagttat
gggaaatttgttgtagaaccacttgaaagaggttatggaactacgcttggtaactcctta
agaagagtattgctgtcctcattaccaggggctgcagtatcttctataaaaattcaggga
gttttacatgagttttcaacaattccaggtgtattggaggatgttcctgaaattattttg
aatattaaaggaatagcagcaaaaatgtattcagatgaacctgttactttacttatagat
atagaaggaccaaaagatgtaacagctggagacataattaccggcttagatgttgaaata
gttaataaggatcatcatatagctactgtaaatgaagatggtagattatatattgaaatg
gaacttgttaagggtagaggttatgttgtatctgagaagaacaaaagggaaggtcaacct
gtaggtgtgatccctgttgattcttcatttacacctgtaagcaaggtaaattataatgtt
gaaaacacaagagtaggaaatataacagattacgataaattagtactcgaagtttggact
aatggtactttagatgcggatgaagcaacttcattgggggcaaaaatacttacagaacat
ttgaatctttttattgggttaactgaacatgttagcaatgtagaaattatggttgaaaaa
gaagaggataagaaagaaaaagttcttgaaatgacagttgaagaacttgacttatctgta
agaagttataactgcttgaagagagcatcaatcaatacagttgaagaactaacccagaag
tcagaagaagaaatgatgaaagtaagaaatcttggtaagaaatcccttgaggaagtacaa
agaaagcttgctgaattaggattaggccttagaaaaagcgatgagtag
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