Tissierella sp. Yu-01: P3962_09945
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Entry
P3962_09945 CDS
T08969
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
Organism
tis
Tissierella sp. Yu-01
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
MTS
Met_10
Methyltransf_25
Cons_hypoth95
N6_N4_Mtase
Methyltrans_SAM
FtsJ
PCMT
Methyltransf_11
PrmA
Methyltransf_4
RrnaAD
BpsA_C
UPF0020
DOT1
Methyltransf_12
Methyltransf_18
Methyltransf_32
Methyltransf_23
DREV
NodS
Motif
Other DBs
NCBI-ProteinID:
WFA08053
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Position
complement(1932308..1933663)
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AA seq
451 aa
AA seq
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MVKKNEIIEFVIDKVEFPNKGKASYEGNLVKFKGGIEGQRVSAKISRKRRGTIEAKIIEV
IEKSPLEAEPRCKHFGICGGCSYQTLSYQDELKLKESQVRELFEREELDINLLGIEPSPI
EGTYRNKMEYTFGDEEKGGPLSLGLHMKGRFYETVNTSDCNIVDNDFTLIRESVRKYFEE
KNMPFYNTRQHQGVLRHLVIRKALSSGEVLVNLVTSSQQEINIEEFKETLIDLKINGEIK
GILHTINDGLSDVVKADRLDLLYGRDYIIEEILGLKFKISPFSFFQTNSLGAEKLYSIAR
EFAGDIDDKVVFDLYSGTGTIAQIMAPVAKKVIGIEIIEEAVEMANENAKLNKLDNVEFI
AGDVLKAVDDLKEKPDLIVIDPPRDGIHPKAINKIIDFSPDTFVYVSCNPVTLARDLKVF
IERGYKVEKAKLMDMFPRTPHVEVVTRIVKE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagaaaaatgaaattatagaatttgtaatagataaggtagaatttcctaataag
ggtaaggcatcttatgaaggaaatttagttaaatttaaaggcggtattgaaggacaaagg
gtaagtgccaaaataagtaggaaaagaagaggaacaatagaggctaaaataattgaggtt
attgagaagtctcctttggaagcagaaccaagatgtaagcattttggtatttgtggtgga
tgttcatatcagacattatcctaccaagatgaattaaaactgaaagaaagccaagtaaga
gaactgtttgagagagaagagttagatattaatcttctagggattgaaccaagtcctata
gaggggacttatagaaataagatggaatacacttttggtgatgaggaaaagggtggacct
ttatcccttgggcttcatatgaagggtagattttatgagacagtaaatacttctgattgt
aacattgtagataatgatttcactctgattagagaatctgttagaaagtacttcgaggaa
aaaaatatgcctttttataatacaaggcagcatcagggagtgcttaggcacttagttata
aggaaggctctttcatctggagaggtccttgttaatttagtaaccagcagtcaacaagaa
attaatatagaagaatttaaagaaacactaatagatttgaaaattaatggggaaataaaa
ggaatacttcatacaattaatgatggtttaagtgatgtggttaaagcagatagattagac
ttactttatggtagggactacatcatagaagaaatattaggcttaaagtttaagatatca
ccattttctttcttccagactaatagtttaggcgcggaaaaactatactcaatagctaga
gaatttgctggggatatagatgataaggtagtgtttgatttatactctggaaccggcacc
attgctcaaataatggctccagttgctaaaaaagtaattggtattgaaataatagaagaa
gcagtggaaatggccaatgaaaatgctaagttaaacaaacttgataatgttgaattcata
gctggtgatgtactaaaagctgtagatgatttgaaagaaaaacctgatttaatagttata
gatccacctagagatggtatccatcctaaggctataaacaaaataatagattttagtcct
gatacctttgtatatgtatcatgtaatcctgtaactttagcaagggatttgaaagtattt
attgaaagaggatataaggtagaaaaggcaaagttgatggatatgttccctagaactcct
catgttgaagtcgtaacacggattgtgaaggagtga
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