Tissierella sp. Yu-01: P3962_11000
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Entry
P3962_11000 CDS
T08969
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P3962_11000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tis03400
]
P3962_11000
Enzymes [BR:
tis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
P3962_11000
DNA repair and recombination proteins [BR:
tis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
P3962_11000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
WFA08253
LinkDB
All DBs
Position
complement(2144174..2144926)
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AA seq
250 aa
AA seq
DB search
MRLVSWNVNGIRAILGKDFMEYFTDIDADIFCLQETKCQDGQVELELEGYYQYWNYAEKK
GYSGTAVFTRVKPIEVNYGIGIDHHDKEGRVITLEYDDFYLVNCYTPNSQNELARLEYRI
QWEDDFRSYLKTIELHKPVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAKMTKLLNS
GFIDTFRHFYPDKEGAYTWWSYLRKARDRNAGWRIDYFIVSEALKDRLESAEILNDVMGS
DHCPVELVIK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagattagtatcgtggaatgtaaatggaatcagagctattctagggaaggacttcatg
gagtactttacagatattgatgcagatatcttttgtcttcaggaaacaaaatgtcaggat
ggacaagttgaattggagttagaaggatattatcaatattggaattatgcagaaaagaaa
ggttattctggaacagcagtttttactagagttaagcccatagaagttaattatggtatt
ggtatagatcatcatgataaggaaggtagggtaatcactctggaatatgatgatttttat
cttgtaaattgttatactcctaattcacaaaatgagttagcaaggcttgagtatagaatc
cagtgggaggacgactttagaagttatctaaaaacaattgagctacataaacctgttata
ttatgtggagatttaaatgtcgctcataatgaaatagacttaaagaatccaaaaacaaat
agaaagaatgcgggttttagcgatgaagaaagagctaagatgacaaaattactgaatagt
ggatttatagatacatttagacacttttacccagataaagaaggagcttatacttggtgg
tcatatttacgtaaagctagagataggaatgccggttggcgtattgactacttcatagta
tctgaagcattaaaagatagacttgaatctgctgaaatattaaatgatgttatgggttcg
gatcattgtcctgtagagcttgttattaagtag
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