Tissierella sp. Yu-01: P3962_11830
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Entry
P3962_11830 CDS
T08969
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
tis
Tissierella sp. Yu-01
Pathway
tis03030
DNA replication
tis03430
Mismatch repair
tis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P3962_11830 (dnaX)
03430 Mismatch repair
P3962_11830 (dnaX)
03440 Homologous recombination
P3962_11830 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tis03032
]
P3962_11830 (dnaX)
03400 DNA repair and recombination proteins [BR:
tis03400
]
P3962_11830 (dnaX)
Enzymes [BR:
tis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P3962_11830 (dnaX)
DNA replication proteins [BR:
tis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P3962_11830 (dnaX)
DNA repair and recombination proteins [BR:
tis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P3962_11830 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DnaX_C
AAA
AAA_5
AAA_22
DNA_pol3_delta_C
AAA_assoc_2
RuvB_N
Rad17
AAA_2
AAA_24
AAA_30
AAA_18
Glyco_tranf_2_5
DUF815
RCF1-5-like_lid
AAA_28
LysC
Mg_chelatase
AAA_19
Motif
Other DBs
NCBI-ProteinID:
WFA08406
LinkDB
All DBs
Position
2313465..2315120
Genome browser
AA seq
551 aa
AA seq
DB search
MYQALYRKYRPKTFNEVLGQEHITRTLRQQVLKGNIGHAYLFSGTRGTGKTSAAKILSRA
VNCLNPQDGNPCNECEICRGILDESIMDVIEMDAASNNSVDDVRDLKEKVIYPPSRARYK
VYIIDEVHMLSKGAFNALLKTLEEPPKHLIFILATTEPERLPQTILSRCQRFDFKRITNR
DIVENMRSITKELEINIDDKALNLIARNSDGAMRDALSLLDQCISFNNEVISYEDATNIL
GIANKYLIFEMVKDINEKNLEKALFKVDEIIQNGKDINQFIKDLIRHFRDLMVAKTSRNP
AEIMESEDVEEYIEQSNGVSLEYILNSLDILNNAEAKGKWSTQPRIILEMAVIKLVSLEK
ELTLEERIERLEQGIRPAATITTKETKVVSEVAKPAVKEKQVIEKQASEEKPIEKIEVVD
DGSVLTLDMIKSQWQNVLQNIKNKKINIYALIMEGELTSYENNLLSVVYDDGFGFHKEAV
SSPQNKEFVEGIVSKYFNKNINIHFHMKSELSSILGSKKESEVKYEEKSEEIKDVIDFFG
EDIVEIRKEGE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagcattatatagaaaatatagacctaaaaccttcaatgaggtattagggcag
gaacatattactagaacccttagacaacaggtcttaaagggcaatattggtcatgcctat
cttttctcaggaacaagaggtacaggaaaaacatctgctgctaagatcttatcaagagca
gttaactgtctaaatcctcaggatggaaatccatgtaatgaatgtgaaatatgtagagga
attttggatgaatccataatggatgtcattgaaatggatgctgcaagtaataacagtgtt
gatgatgtaagggacctaaaagagaaggtaatatatcctccatcaagagcaaggtataaa
gtatatataatagatgaggtacatatgctttcaaaaggtgcatttaatgcacttttaaag
actttagaagaaccaccaaaacatctaatatttatattagccactactgagcctgaaaga
ctaccacagaccatattatcaaggtgtcaacgatttgactttaaaagaataacgaataga
gacattgtagagaatatgagaagtataacaaaggaacttgaaataaatatagatgataag
gctcttaatttaattgcaagaaattctgatggagcaatgagagatgcactaagtttacta
gatcagtgtatatcttttaataatgaggtaatatcttatgaggatgcaacaaatatatta
gggattgctaataaatacttaatatttgaaatggtaaaggatataaatgaaaaaaatctt
gagaaggcattgtttaaagtagatgaaatcatacaaaatggtaaagatataaatcagttt
ataaaggatttgattagacatttcagagatcttatggttgcaaagacatctagaaatcca
gctgaaattatggaatctgaagatgtagaggaatatatagaacagagtaatggtgtgagc
ttggaatatatattaaactctttagatatattaaataatgctgaagctaaaggtaaatgg
tcaactcaaccaaggataatattagaaatggcagttattaaattggtttcactagaaaaa
gaattgaccttggaagagcgaatagaaagattagagcaagggattagaccagcagctaca
ataactacaaaagagacaaaagtagtaagtgaggtagcaaaacctgcggttaaagaaaaa
caagttatagaaaagcaggctagtgaagaaaagcctattgaaaagattgaagttgtagat
gatggcagtgtacttactctagatatgataaagagccaatggcaaaatgtattacaaaat
atcaagaataaaaagatcaatatatatgctttgattatggaaggggagttaacctcttat
gaaaataacttactatccgttgtatatgacgatggatttggtttccataaagaagcagta
agttcaccgcagaataaagaatttgttgaaggaattgtttctaaatattttaataaaaat
attaatatacattttcatatgaaatctgagctttcaagtatattaggtagtaaaaaagaa
agtgaagttaaatatgaagaaaaatctgaagagattaaagatgtaattgatttctttggt
gaggatattgtagaaataagaaaggaaggagaataa
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