Thermoanaerobacter italicus: Thit_0226
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Entry
Thit_0226 CDS
T01178
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tit
Thermoanaerobacter italicus
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tit03400
]
Thit_0226
DNA repair and recombination proteins [BR:
tit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Thit_0226
Archaeal homologous recombinant proteins
Thit_0226
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_ATPase
SMC_N
ABC_tran
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ADD01551
UniProt:
D3T620
LinkDB
All DBs
Position
255855..259388
Genome browser
AA seq
1177 aa
AA seq
DB search
MRPLKLRISGLNSFVEEQVIDFERLTERGLFGIFGPTGSGKSTIIDAITLSMYGKIPRNS
REFINTNSISTSVSYEFEIGIGAERKRYIVERNIKKDLKTGGYKTTLARIREMGEKGEKV
LCEGDREVQKKIAEILGLTAEDFTRSVVLPQGKFSDFLKLTGKDRRDMLERIFGLEKYGN
NLLKKIREVKNEKNLILNRVSGELSRYEGVSSEALQEMTKKLEILKGQEEKLAAEKNRLD
LEKEKLKAIWEKQQELNQYLQKKELLEGKIEEIERKKVKIKKAEKALSVKPYIDAVNETN
SKIAQNKEEVEKYTKELTVIEENLKKIEKEYDIALQKKEEKIPLLIEKEEKLKRALQIQK
EVKTINEEREKLLKTYRAVEKEIEKLKKELEILSNDIEITKKVLEDKDKKIEELKISSGQ
REKIFSALEVQKEFERIEKDKREKEVKIFELEEAIKRQQKEHERLKNLIKQKEEEIQALE
EKIRNLEGHMPPTSDELLIMQQQLEEQKSKFLEAKENDELRQNIKGILDEISDLKGKLKE
QIKKLEDDIKTKSKQLENLTKEIEEIQRQNIAGELAKDLEEGMPCPVCGSVHHVKLAQKI
DEELINEKRAFEEIFKREIEEFQNQLLKLKGELVALEAKEEFHKKEYDRLEEKLKGIDIK
AFEQNVGQLQLRFEKAKLKTERWNKEKEEINALLKKLGEEKAQLDLEEARLKESLGKDVK
ALKELKVSVEELSRAYSCILDQLESLRTELEIRDFKQKVIEINEKDREVEKLQKESELLE
KKLEELVNKKEILSNKINELLIKKAQIVEIGKEKSKYLQERQKEIDILSEGKEIENYLKE
VQRERENILKEEKILKEQFENEKKKRQETENKKVSALENQILLNNMLKDQFEKLNASISK
NGFKDEKEVMECFLDEGTIKSLEEEIKNFENEYISICSNIERLDSTLNGQRIEEEVWRNL
EEKIKETEQALTEKRKEIGATQKTLEDIQNNLQKVEELTEQKKELEQLLDMLEDLDKLFQ
GNHFVEFVATRQLKLITFSASKRLKEITRGRYALELDSDNNFVMRDDFNGGTRRSVDTLS
GGETFLTSLSLALALSSHIQLKGRAPLEFFFLDEGFGSLDSELLDVVMTSLERLRNDKMV
VGIISHVEELKNRVPVKLIIIPPSTAGEGSKVRIEYS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagacctttgaagcttagaatatcaggacttaacagttttgttgaagaacaagttata
gactttgagcgtcttactgaaagaggactttttggaatatttggtccgactggaagtggc
aaatctactatcattgatgctattactctttcaatgtatgggaaaattcctagaaacagc
agagaattcataaacaccaactctatttctacatcggtaagttatgaatttgagatagga
attggtgccgaaagaaagaggtatatagtagaaagaaatataaaaaaagatttgaaaact
ggcggttacaaaactactttagcgagaataagagaaatgggggaaaagggagaaaaagtt
ctatgtgaaggagatagagaagtacaaaagaaaatagctgaaatattaggtcttacagct
gaagactttacgcgatctgtggtattgcctcaaggaaagtttagtgatttcttaaagttg
acaggtaaagatagaagagatatgttagaaagaatttttggattggagaagtacggcaat
aacttgcttaaaaaaattagagaagtaaaaaatgaaaagaatcttattttaaatagagta
agtggagaactcagccgttatgagggagtatcttctgaggctttgcaggaaatgacaaag
aagttggaaatccttaaagggcaagaagaaaaattagccgccgaaaagaatcggttggat
ttagaaaaagaaaaattaaaagcaatatgggaaaagcagcaagaattaaatcaatatctt
caaaaaaaggaacttttagaaggaaaaattgaagagatagagagaaagaaagtaaaaatt
aaaaaagcagaaaaggccttgtcagtaaaaccttatatagatgcagttaatgaaactaat
tctaagatagctcaaaataaagaagaagtagaaaaatatacaaaagaattgacggtaatt
gaagaaaatcttaaaaagattgaaaaggaatatgatatagcattacaaaaaaaagaagaa
aaaatacctttattgattgagaaagaagagaaattaaaaagggctttgcaaattcaaaaa
gaagttaagacgataaatgaagaaagagagaagcttttaaagacatacagggctgtcgag
aaagaaattgaaaagctaaaaaaggaattagaaatattatcaaatgatatagagattacg
aaaaaagtattagaagataaagacaaaaaaatagaagaattaaaaattagctctgggcag
agagaaaaaatattctctgcgctagaagtccaaaaagaatttgagagaatcgaaaaagac
aagagggaaaaagaggtaaagatttttgagttggaggaagctataaaaaggcaacagaaa
gagcatgaaagacttaagaatctgataaagcaaaaagaggaggaaatacaagctttagaa
gaaaaaattagaaatcttgaaggtcatatgccgccgactagcgatgaacttcttatcatg
cagcagcagttggaagaacaaaaaagtaaatttttagaggcaaaagaaaatgatgagtta
aggcaaaacattaaaggaattttagatgaaatttctgatttaaaagggaaattaaaagag
caaataaaaaaactggaagatgacataaaaacaaaaagcaaacaattggaaaatctaact
aaagaaatagaagagattcaaagacaaaatatagcaggggaattggcaaaagatttagaa
gagggaatgccttgtcctgtttgtggctcagtccatcatgtaaaattggctcaaaaaata
gatgaagaattaataaatgaaaaaagagcttttgaggagatttttaaaagagaaattgaa
gaatttcaaaaccagcttcttaaattaaaaggggagttggtagctttagaagcaaaagaa
gaatttcataaaaaggaatatgatagattagaggaaaaactaaagggtattgatataaaa
gcctttgaacaaaatgtagggcagttgcaacttagatttgagaaggcgaaattaaaaaca
gaaagatggaataaagaaaaagaggaaataaatgctttacttaaaaagctgggagaagaa
aaggcacagttagatttggaggaagcgagactaaaagaaagcctcggcaaggatgtcaaa
gctctaaaagagttgaaagtatcagtagaagagcttagtagagcatattcatgtatttta
gaccaattagaaagtttaaggacagaattagagattagagattttaaacaaaaggttata
gaaataaatgaaaaagatagagaagtagaaaagcttcagaaggaaagtgaacttttagag
aagaaactggaggaattggtgaataaaaaagagattttgtcaaataagattaatgaactt
ttaataaaaaaagctcagattgttgagataggcaaagaaaagtcaaagtacctccaagaa
agacaaaaagaaatagatattttatcagaaggcaaagaaatagagaattatttaaaggaa
gtacagagagaaagagaaaatatattgaaagaagaaaaaatattaaaagagcagtttgaa
aatgagaaaaagaagaggcaggagacagaaaacaaaaaagtatcagctttagaaaatcaa
attttattaaacaatatgttaaaagatcagtttgaaaaacttaatgcttctatttcgaaa
aatggatttaaggatgaaaaagaagttatggaatgctttttagatgaaggtacgataaag
tccttggaagaggagataaaaaattttgaaaatgagtatatatccatatgttcaaacatt
gagaggttggattctactttgaacgggcagaggattgaagaagaggtttggagaaattta
gaagaaaaaatcaaagagacagaacaagccttaactgaaaaaagaaaagagataggtgct
acacaaaaaacacttgaagatatacaaaataatctccaaaaagtagaggaattaactgag
caaaagaaagaactagagcagttattagatatgttagaagatttggataaactgtttcaa
gggaatcattttgtggagtttgtggctacaaggcaacttaagcttattactttttctgct
tctaaaaggctaaaagaaattacaagaggaagatatgcattagaattggactctgacaat
aattttgtcatgagggacgactttaatggggggacaaggcggtctgttgatactttatct
gggggagagacttttttgacttctctctctttagctttggcactttcttctcacatacaa
ttaaaaggtagggcgcctttagaatttttcttcttggatgaaggctttggcagccttgat
tcagaacttcttgatgtggttatgacatccctagaaagacttcgcaatgataagatggtt
gtaggtataataagccatgttgaagagctaaagaatagggtacctgtaaaacttatcata
attcctccctcaactgcaggagaaggaagtaaggtgaggatagagtatagttaa
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