Thermoanaerobacter italicus: Thit_0554
Help
Entry
Thit_0554 CDS
T01178
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tit
Thermoanaerobacter italicus
Pathway
tit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thit_0554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tit03400
]
Thit_0554
Enzymes [BR:
tit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Thit_0554
DNA repair and recombination proteins [BR:
tit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Thit_0554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
ADD01855
UniProt:
D3T7C3
LinkDB
All DBs
Position
601019..601912
Genome browser
AA seq
297 aa
AA seq
DB search
MKYSVEEKGTKVIVRGIEDFNLKETFECGQCFRWNEEEDGSYTGVAYDRVVNVKLEEDML
IIDNTDLNDFYDIWFDYFDLGRDYKKIKENLSRDPILKEAIQYGQGIRILRQDTWETLVS
FIISQNNRIPQIKKVIENLASSFGEPIEYKGKIYYTFPKAEELVMFDVDTIAKTKCGFRA
KYILDAASKVFSGEIDLLKLFEYSTNEIRDILMNINGVGPKVADCVILYSIGRYDTFPTD
VWIKRIVEYLYLKREGTPLEIQLFAIDKFGDLSGFAQQYLFYYGREMGKKIFNERKK
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatagtgtggaagaaaaggggacaaaggttattgtaagggggattgaagatttt
aatcttaaggagacttttgaatgcggacagtgttttagatggaatgaagaagaggacggg
agctatacaggggttgcttacgatagagtggtaaacgtgaaattggaagaagacatgttg
ataattgacaatacagatttaaatgacttttatgacatttggtttgactatttcgattta
ggaagggattataaaaaaataaaagaaaatctttcaagagatcccatattaaaagaagca
attcaatatgggcaaggtataaggattttacgccaagacacatgggaaactttagtctct
tttataatctcacaaaacaataggatacctcaaataaaaaaagtcatagaaaatctcgcc
agttcttttggagagccaatcgagtataaaggaaaaatttattatacttttcctaaagca
gaagaattggttatgtttgatgtagacacaattgccaaaacaaaatgcggttttagggcg
aaatatatactggatgcggcttctaaagttttttctggagagatcgatcttttaaaattg
tttgaatacagcactaatgagataagagatattcttatgaatataaacggggttggtccg
aaagttgcagattgtgttattttgtattctataggtagatacgatacttttcctacagat
gtatggataaaaagaattgtcgaatatttgtatttaaaaagagaggggactcctttagaa
attcaattatttgcgatagataagtttggagatttatctggttttgctcaacagtattta
ttctattatggtagggagatggggaaaaagatctttaacgaaaggaagaagtaa
DBGET
integrated database retrieval system
