Thermoanaerobacter italicus: Thit_1019
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Entry
Thit_1019 CDS
T01178
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tit
Thermoanaerobacter italicus
Pathway
tit03410
Base excision repair
tit03430
Mismatch repair
tit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Thit_1019
03430 Mismatch repair
Thit_1019
03440 Homologous recombination
Thit_1019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tit03400
]
Thit_1019
DNA repair and recombination proteins [BR:
tit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Thit_1019
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thit_1019
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Thit_1019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ssDNA-exonuc_C
PDZ
Motif
Other DBs
NCBI-ProteinID:
ADD02289
UniProt:
D3T8K7
LinkDB
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Position
1071869..1074316
Genome browser
AA seq
815 aa
AA seq
DB search
MGDLMPKIYRWILKESKNSQLSQEIQKTYGLSKIIADMLASRLNLHEVKSFLNPDLKDLH
SPYLLRGIKEAKELIQQHIASKDLITIYGDYDVDGITATAILYLTLKKLGAKLDYYIPER
LVEGYGINEEAIDKIAERGTKLIVSVDCGITSVKEVEKAKILGIDVIITDHHSIPKEIPQ
ADVVINPHLPGIEYPFCDLAGVGVAFKLSQALIGEEAHKFLDIVSIGTIADIVPLLGENR
IIVKEGLKRLNETQNIGLKALIKASGLENVEIDEYHVGFILAPRLNAAGRLKSAEAAVRL
LISHSKEEVEKIAEYLNQENLNRQQIENQILQQAIKKVEETVDLNREKVIVLWDENWHPG
VIGIVASRITERFHRPSILISLGEEEGKGSGRSIEGFNLYKALEYCKDYLIKYGGHEMAA
GINIEKNNLEIFKAKINEYADTVLSELDLIPSLKIEAKVKNEKIDIEIAKQVQKLKPFGS
NNPRPNFLFEGLTVTKIFDLNSGRHKKIIAQKGKFVYELMLFDTAEKRNDIKIGDIIDVV
GSVEINTWNGIESVIINVKDLRVKLPLFSYYKNLSKIMIEYKLEKKEINRKVDYIIDKRG
INNKWEYVLKLFKGESKTAVIVNTAVELKSLLRYLKKEKFVNFSFCNMNCKKENGILFFT
NSLEPLKYYDDIIIYDIPFKKEIFYYILYHSQGKKIHLVFNESDIYYNLKSFDEIFPQRK
DFIKLYKFIEKGNTILFKEHLHPHLNLNPIKFLFCIKAMQEIGLINVKERDNIFMLSKNS
VPQKVNIEQTQIMQRIFSAKKEFIEFAKFLVSQKI
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgatttgatgcctaaaatttacagatggattttaaaagagagtaaaaactctcaa
ttgtctcaagagatacaaaaaacttatggattatccaaaataattgctgacatgcttgca
tcaagattaaacctccatgaagttaagagttttttaaatcctgatttaaaagatttacac
tctccttatcttttaaggggaataaaagaagcaaaagaattgatacaacaacatattgcc
tcgaaggatctaatcaccatttatggggattacgatgttgatgggattactgccactgct
atcctatatttaaccttaaaaaaattaggggcaaaattggattattacataccggaaaga
ttagttgaaggatatggtataaatgaagaagcaatagacaaaattgcagagaggggaaca
aaacttatagttagtgtagactgtggtataacctctgttaaggaagtggaaaaagctaaa
atcttgggaatagatgtaataataactgaccatcatagtatccctaaagagataccacaa
gcagatgtggtgataaatccccatttgcctggtattgaatatcctttttgtgacctggca
ggggtaggggttgcttttaaactgtcacaagctcttattggagaagaagctcataaattt
ttggatatcgtttcaattggtacgattgcagatattgttcctttattaggagaaaataga
ataattgtaaaagaagggctaaaaagactaaatgaaacacaaaatataggtttaaaagcc
ctcataaaagcttctggattagaaaatgttgaaattgacgaatatcatgtgggatttatc
ttagcccctcgtcttaatgccgcaggtcggctcaaaagtgcagaagcggctgtcagatta
ttgataagccatagtaaagaagaagtagaaaagatagcagaatatttaaaccaggaaaac
ttaaatagacaacagatagaaaatcaaatacttcaacaagcaatcaaaaaagtagaagag
actgttgatttgaatagagaaaaagtaattgtactgtgggatgaaaattggcatccgggt
gttattggaattgtagcctctcggataacagaaaggtttcatagaccctctatacttata
agtttaggggaagaggagggcaaaggttcggggcgaagcatagaaggctttaatttatat
aaagcattagaatactgtaaagattatttgataaaatatggcggtcatgaaatggctgct
ggaataaatattgagaaaaacaatttggagatttttaaagcaaaaataaatgaatacgct
gatactgtgcttagtgaacttgatttaatcccaagtttaaaaatagaggcaaaggttaaa
aatgaaaagatagatatagaaatagctaagcaagttcaaaagcttaaaccttttggcagc
aataatccgcggcctaattttttatttgagggtttaacagttacaaaaatatttgattta
aatagtggaagacacaaaaagatcatcgcccaaaaaggaaaatttgtctatgaacttatg
ttgttcgatacagcagaaaaaagaaacgatataaaaataggggatataatagatgttgta
ggaagtgttgaaataaatacttggaatggaatagagtcagtaatcataaacgtaaaagat
ttaagagttaagttgcctctattttcctactataaaaacttgagtaaaatcatgatagaa
tacaagctagagaaaaaagaaataaatagaaaagttgattatataattgataaaagagga
attaataataagtgggaatatgtgctcaaactttttaaaggggaaagcaaaacagctgtc
atagtaaatactgctgtagaacttaagtcattacttagatatctcaaaaaagaaaagttt
gttaatttttctttttgtaatatgaattgcaaaaaagaaaatggcatactattttttacg
aattctttagaaccacttaaatattatgacgacataattatttacgatataccttttaaa
aaagaaattttttattatatcctttatcattcacaaggaaaaaagattcatttagtcttt
aatgaatcagacatatattataacttaaaatcttttgatgaaatttttcctcagagaaaa
gattttattaaactttacaaatttatagaaaaaggaaacaccattttatttaaagaacat
ttacatccgcatctgaatttaaatccaataaaatttttattttgcataaaagcaatgcaa
gaaataggattgataaatgtaaaagaacgtgataatatttttatgttaagcaaaaattcc
gtgccacaaaaggttaatattgaacaaactcaaataatgcaaaggatattctcagctaaa
aaagagtttattgaatttgccaagttccttgttagccagaaaatttaa
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