Thermoanaerobacter italicus: Thit_1192
Help
Entry
Thit_1192 CDS
T01178
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
tit
Thermoanaerobacter italicus
Pathway
tit03030
DNA replication
tit03430
Mismatch repair
tit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Thit_1192
03430 Mismatch repair
Thit_1192
03440 Homologous recombination
Thit_1192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tit03032
]
Thit_1192
03400 DNA repair and recombination proteins [BR:
tit03400
]
Thit_1192
Enzymes [BR:
tit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Thit_1192
DNA replication proteins [BR:
tit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Thit_1192
DNA repair and recombination proteins [BR:
tit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Thit_1192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
RNase_H_2
tRNA_anti-codon
DEDDh_C
Rv2179c-like
HHH_3
Radical_SAM
tRNA_anti_2
SAM_GIDA_C
CSD
Motif
Other DBs
NCBI-ProteinID:
ADD02456
UniProt:
D3T2K4
LinkDB
All DBs
Position
complement(1225686..1229906)
Genome browser
AA seq
1406 aa
AA seq
DB search
MIPALFLQEFEIKKVKLLKKERKLIVSVSSNNNANSQFRKFQDFLLNKFPLIKEVEVVVE
REEKYNCLQDIIDNFEEIILKLSEEHPASLGFLKTCEVVAEDQKIIIKAPNEVVYQFIKS
NRIDYALRKFLKDKYGIETEINVILLQELQDTMGKIIREEDIKVIEEITKNGHKQQDVNT
TEREDKGHSQILLGKEIKAEAISIKNITAEIEEAIIEGEIFSLEFKELKSKILMTFDITD
YTSSILVKAFLTEEKYNSLKENIQVGSFIKLRGKVFYDKYEGDLVISLKDLQLISPKERK
DLGEKKRVELHLHTQMSSMDAVASATEVIKRAAKWGHKAIAITDHAVVQAYPEAMEASYK
YGVKVIYGVEGYLVDDGVPIVMGDTDSTLDDEFTVFDIETTGLSNINDEIIEIGAVKIKE
GKIIDTFETFVNPKIPISSFITKLTGIDESMVKDAPSIEEILPKFLEFSSNSVLVAHNAN
FDVSFIKSKAKKFNLNVNNTVLDTLELSRHLYKDLKNYKLDTLAEHLQVKLEHHHRAVDD
ARATAEIFIKTIDRLKELGVKKVKDINDILRESEVDIKKLPVYHVTILVKDQRGLRNLYE
IISKSNLEYFHRTPRIPKSLLISMREGLIIGSACEQGEVFRAILSNLEEKKLENIISFYD
YLEVQPVGNNEFLIEKGEVKSVEELKEINRRIYLLGKKYNKLVVATGDVHFLDPWDDIYR
KILMAGKGYKDADRQPPLYFKTTDEMLKEFEYLGEEVAKEIVIDNPNKIADLIEEVKPIP
DGTFPPVIEGAEEELRKLTLDKAHEIYGDPLPEIVQNRLDRELNSIINNGYAVMYIIAQK
LVSKSLKDGYLVGSRGSVGSSLVATMSGITEVNPLPPHYVCPNCKYSEFITDGSYGCGVD
MPDKICPHCGTLMKKDGFDIPFEVFLGFEGDKEPDIDLNFSGEYQPIAHKYTEELFGKGH
VFRAGTIGTLADKTAYGFVKKYFEERSLVVHKSEIKRLTMGCTGVKRTTGQHPGGIMVVP
KDKSIYDFTPIQHPADAEDTDVITTHFDYHSISGRLLKLDILGHDDPTVIRMLEDLTGVN
AREIPLDDKKTMSLFTSVEALGIDPEELNTPVGTLGLPEFGTKFVRQMLIETRPTTFAEL
VRISGLSHGTDVWLNNAQDIIREGIATLKEVISTRDDIMLYLISKGMDKKLSFKIMENVR
KGKGVTPEEIEEMKKHGVPNWFIESCQKIKYMFPKAHAVAYVIMAFRIAYFKVHYPEAFY
ATYFTVRADDFNLDIVLKGRDSIKNAIKEIEAKGNNASPKEKSLLTVLEVALEMYLRGFK
FINVDLYKSDAVKFLITNEGILPPLNSLEGVGIQAAKTIAQERENGKFLSVEDFRNRTKV
SKTVIEILRKYGCLNDLPESNQLSLF
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgattccagcattatttctgcaggaatttgaaataaaaaaagtaaaactgttaaaaaaa
gagagaaaattaattgtaagtgtatcctctaacaataatgcaaattcacagtttagaaaa
tttcaggattttttgcttaacaaatttcctttgattaaagaagtggaagttgtagtagaa
agggaagagaaatataattgccttcaggacataatagataattttgaagaaataatttta
aaactgagtgaagaacatccggcttctcttggttttttaaaaacttgtgaggtagtagca
gaagatcaaaagataataattaaagctcctaatgaagtagtctaccaatttataaagagc
aatagaattgactatgctcttaggaaatttttaaaggataaatatggaattgaaacagaa
ataaatgtgatccttttacaggaactccaagacacaatggggaaaatcataagggaggaa
gatataaaagttattgaagaaattactaaaaatggtcataaacaacaagatgtcaataca
actgaaagggaggacaaaggacattcccaaatacttttaggaaaagaaataaaagctgaa
gcgatatctattaaaaatattactgcagaaatagaagaagcaataattgaaggtgaaatc
ttttctctcgaatttaaggaattaaaatctaaaattttaatgacttttgatataactgat
tatacttcatcaatacttgtaaaagcctttttaactgaggaaaagtataattctttaaaa
gagaatatccaagtaggcagttttataaagttaagggggaaagttttctacgataaatat
gaaggagatttagtaataagtttaaaagacctgcagctgatatccccaaaagagagaaaa
gatctaggtgagaaaaaaagagtagagcttcacttacacactcaaatgagcagtatggat
gcggtagcctctgcaacagaagtgattaaaagagcagcaaaatggggacacaaagctatt
gctataacagaccatgcagttgtacaggcatatccagaagcgatggaagcctcctataaa
tatggagtaaaagtcatatacggtgtagaaggctatttagtggatgatggtgtacctatt
gtaatgggagatacagactctaccttagatgatgagtttactgtttttgatatagagacg
actggtctttccaatataaatgatgaaataatcgaaattggtgcagtaaaaataaaagaa
ggcaaaataatagatacttttgaaacctttgttaatcccaaaattcctatttcttctttt
ataaccaaacttactggaattgacgaatctatggttaaagatgctccttctatagaagaa
atattacctaaatttttggagttttcttctaacagtgttttagtggctcataatgcaaat
tttgatgtgtcttttataaaatctaaagctaaaaaatttaatttaaatgtgaacaatacg
gttttagataccttagaactaagtaggcatttatataaagatttgaaaaattacaaacta
gatactttggctgaacacttacaggtaaaactggaacaccaccacagagcggtagacgat
gccagagctactgctgaaatatttataaaaactatcgatagattaaaagaattaggagta
aaaaaggtgaaagatataaatgatatattgagagaaagtgaagttgatataaagaaattg
cctgtctaccatgttacaattttggtaaaagaccaaagaggattgagaaatttatacgaa
ataatctctaaatctaatttagaatatttccatagaacacctcgtatccccaaaagttta
cttattagtatgagagaaggtcttatcattggttctgcttgcgaacaaggggaagttttt
agggcgattttatctaatttagaggaaaagaaactagagaatattatttctttttacgat
tatttagaagtacaacctgtgggaaataatgagtttttaattgaaaaaggagaagtaaaa
agcgtagaagaattaaaagaaataaatagaagaatttatcttttaggtaaaaaatacaat
aaattagtggtagcaacgggagatgtacactttttagatccgtgggatgatatatacaga
aaaattttaatggcaggaaaaggatataaggatgcagataggcagccgcctctttatttt
aaaacaaccgatgagatgctaaaagaatttgaatatttaggagaagaagtagcgaaagag
attgtaattgataatcctaataaaattgctgaccttatagaagaagtaaaacccatacca
gatggaacattccctcccgtaatagaaggagctgaagaagaattaaggaagcttacttta
gataaggctcatgaaatatacggcgaccccttgccagaaatagtacaaaatcgcttggat
agagaattaaattctataattaacaatggatatgcagtcatgtatattatagctcagaaa
ttagtgtctaagtctttaaaagatgggtatttggttggctctagaggttctgtaggctct
tctttagtggctactatgagtggaataacagaagttaatccactgcctcctcattatgtt
tgtccaaattgcaagtattccgagtttataactgatggaagctatggttgtggtgtggac
atgccggacaaaatttgtcctcactgtggtactttgatgaagaaggatggctttgatata
ccctttgaagtgtttttagggtttgaaggagataaagaacccgatattgacctcaatttt
tctggagaataccaacctattgctcataagtatacagaagaactttttggaaaaggacac
gtttttagagcaggtactattggaactttagcagataaaactgcttatggatttgtgaaa
aaatattttgaagaacgtagtttagtagttcataagtcagaaatcaaaaggcttactatg
ggatgcacaggggtaaaaagaactacaggacaacatccaggtggaataatggtagtgcca
aaggacaagagcatttacgactttactccaatacagcatcctgcagatgcagaagacact
gatgttataacgactcattttgattaccattcaataagcggaaggcttttaaaactggat
attttagggcatgatgaccctacagttatcagaatgcttgaagatttaaccggcgttaat
gcaagagagattcctttggatgataagaaaactatgagcttattcaccagcgtagaagca
ttgggaatagaccctgaagaactaaatactcctgtgggtactttgggattgcctgagttc
ggaacgaagtttgtaagacagatgcttattgagactcgtcctactacttttgcagaacta
gtacgcataagcggactttctcacggcactgatgtatggcttaacaatgctcaggacata
ataagagaaggaatagctacattaaaagaagtaatatctacaagagatgatataatgctt
tatctgataagcaaaggtatggataaaaaattatccttcaaaataatggaaaatgtaaga
aagggcaaaggtgtgacgccagaagaaatagaggaaatgaaaaaacacggtgttccaaat
tggtttattgagtcttgccaaaaaataaaatatatgtttcctaaagcccatgctgtggca
tatgtaataatggcatttcgaattgcttattttaaagttcattatccagaagccttttat
gctacatactttactgttagagcagatgactttaatttggatattgtattaaaagggaga
gacagcataaaaaatgctataaaagagatagaagcgaaaggaaataatgctagtcctaaa
gaaaaaagccttttaacagtattagaagtagctttagagatgtatctaagaggatttaag
tttataaatgtagacttatataaatctgatgcagtcaaatttttgattactaatgaagga
atattgccacctcttaattctttagaaggtgtaggaatacaagcggccaaaacaattgca
caagaaagagaaaatggtaaatttctatctgttgaagattttagaaacagaacaaaggtc
agtaaaacagttatagaaatattaagaaaatatggctgcttaaatgatttgccagaatct
aatcaattaagtttattttag
DBGET
integrated database retrieval system
