KEGG   Thermoanaerobacter italicus: Thit_1315
Entry
Thit_1315         CDS       T01178                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
tit  Thermoanaerobacter italicus
Pathway
tit03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Thit_1315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tit03400]
    Thit_1315
Enzymes [BR:tit01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Thit_1315
DNA repair and recombination proteins [BR:tit03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Thit_1315
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C Zn_ribbon_PriA T4_MRH Helicase_C_2 MarR TrwB_AAD_bind Viral_helicase1 Zn_ribbon_6 TrmB AAA_19 ADDB_N HypA
Other DBs
NCBI-ProteinID: ADD02577
UniProt: D3T2X5
LinkDB
Position
complement(1337585..1339783)
AA seq 732 aa
MFAEVVVDIKSSNTDRVYTYHIPEGMNVKIGMRVSVPFNNRYIEGYVISITDKASYSVDK
IKDIHRILDSYSIFDEKMIELAKWMRDYYKCYFSEALQTIMPVGIKQGEKKVKVVKINID
EIPFQLSKRAPKQYEILQYLKNRSPIRLSELVKVLNIDYGVIRSLQNKGYIEIYEEEVLR
FSVKDIEKTKPLLLTEEQQKAVEEVKSSILTGTFDKYLLFGVTGSGKTEVYLQLIDEAIK
IGKSAIVLVPEISLTPQTIERFVSRFGNRVAVIHSGLSPGERFDEWRKVKNGLVDVVVGV
RNAVFAPFNNLGLIIIDEEHETTYKQSDLRPKYNAKEVAEKRCEIQKAVLVMASATPSLE
TYYKANKGEYKLIRLTKRINVSMPQIEVVNMSEELASGNTSIFSRKLFSYIKENLKRREQ
TILFLNRRGYSSFVSCRDCGYVPKCSNCDISLTYHFEDKKLVCHYCGYEEPMKDTCPKCG
SKRIRYLGIGTERVENDIKKFFPNARVLRMDVDTTRKKGSHEKIFYDFRNGKADILIGTQ
MISKGFDIPNVTLVGVILADITLNLPDFRSSERTFQLLTQVAGRAGRGEKPGRVVIQTYE
EDHYSIVAAKQQNYGKFYNEEIKYREIFKYPPFSHLMNVVISGEKEEEVKNMAANAYLTC
QKLINKLQNKSYNKILGPAPAPISKINNRYRWQVILKSEDRSILAKIAEEIQKMKYPKDI
RISIDIDPLNIM
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgtttgccgaggtcgttgtagacattaaatcttctaatactgacagggtatatacttat
catattcctgaaggaatgaatgtaaaaattgggatgagagtatctgttccttttaataat
aggtatatagagggttatgtaataagtattactgacaaggcgtcttactcggtggataaa
ataaaggatatccataggattttagatagctacagcatatttgatgaaaaaatgattgaa
ctggctaagtggatgagggattattataaatgttatttttctgaagctcttcagactata
atgcctgtagggataaagcaaggggaaaagaaggtaaaggttgtgaaaataaatattgat
gagatacctttccaactttctaaaagagcgccaaagcaatacgagattttacaatattta
aaaaatagaagtcctattaggctatctgagcttgtcaaggtgctcaatatagactatgga
gttataagaagtttacaaaataaagggtatatagaaatttatgaggaagaagtattgaga
tttagtgtaaaagatattgaaaaaaccaagcctctattattgacagaagaacaacaaaaa
gctgtagaagaggttaaaagttctatcttgacaggcacttttgataaatatttgcttttt
ggtgtaacaggaagtggcaaaactgaagtttatcttcaattgatagatgaagctataaaa
ataggcaaaagcgctatagttttagtaccagaaatctcattgacgcctcagactattgaa
aggtttgtaagccgatttggcaatagggtagctgtgatacacagtggcctttcaccggga
gaacgttttgatgaatggcgaaaagtaaaaaatggtttagtggacgtagtagttggtgtg
agaaatgcagtttttgctccttttaataatcttggacttattataattgacgaggaacat
gagaccacctacaaacaatcagatttacgacctaaatataatgctaaagaagtggcagaa
aagcggtgtgaaatacaaaaagcagttctggttatggccagtgctactccttctttagag
acctattataaagctaataaaggagaatataaacttataagacttacaaagaggattaat
gtttctatgccgcagatagaagttgtcaatatgagtgaggaattggcaagcggaaatact
tcaatatttagtcgtaaattattttcctatataaaagaaaatcttaaaaggagagagcaa
actattctttttttaaatagaagaggatactcttcatttgtttcctgcagagattgtggc
tatgtgcctaaatgttccaattgtgatatttctttaacttatcattttgaggataaaaaa
ttagtttgtcattattgcggttatgaagagcctatgaaagatacttgtcctaaatgtgga
agtaaaagaattaggtatttaggcataggaaccgaaagggtagaaaacgatataaaaaag
ttttttcctaatgcaagagttttgaggatggatgtagataccacaagaaaaaaaggttct
catgagaaaattttttatgactttagaaatggtaaggcagatattctaatcggtacgcaa
atgatatcaaaaggctttgacattccaaatgtcacattggtaggagtaatacttgcagat
ataactttaaatcttcctgattttaggtccagtgaaaggacttttcagctgcttactcag
gtagctggaagggcaggaagaggtgaaaagcctgggagggttgttatacagacttatgaa
gaagatcactacagcatagttgctgcaaagcagcaaaattatggaaagttttacaacgaa
gaaattaaatacagagaaatttttaaatatcctcctttttcacatctgatgaatgtagtg
atatcaggagaaaaggaggaagaggttaaaaatatggccgcaaatgcttatttaacttgt
caaaaacttattaacaaacttcaaaataagagttataataaaatactaggacctgctcct
gctcctataagtaagataaacaatagatatagatggcaggtcattttaaaaagtgaagat
agaagtattttggcgaaaatagcagaagaaatccagaagatgaaatatcctaaagatata
agaatatcaatagacattgaccctttgaatataatgtaa

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