Thermoanaerobacter italicus: Thit_1325
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Entry
Thit_1325 CDS
T01178
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tit
Thermoanaerobacter italicus
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tit03016
]
Thit_1325
Enzymes [BR:
tit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Thit_1325
Transfer RNA biogenesis [BR:
tit03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Thit_1325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
RNA_binding
SH3_CYT4
Dynein_heavy
Motif
Other DBs
NCBI-ProteinID:
ADD02587
UniProt:
D3T2Y5
LinkDB
All DBs
Position
complement(1347630..1348178)
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AA seq
182 aa
AA seq
DB search
MRTFIGIELGEKATDELSRFQEVLKNYTIKGRWTHKDNFHITLKFLGEIEAESITEIEDA
VKVAAKSINPFYIKFDKVGFFKGNKDMRVLWVGTEENPFLNKLHDNIDEELHKIGFKKDE
RKFTSHITIARDIRLNIGIEEVNNLFEKQKKNDILVDTVFLYESVIQENRRKYIPIFSVL
LK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaggacatttattgggatcgagttaggtgaaaaagctacagatgaattatcgagattt
caggaggtactgaaaaattatacgataaaaggaagatggactcataaagataatttccat
ataactttaaagtttttaggagaaatcgaggcggaaagcataaccgaaatagaagatgct
gttaaagttgctgcaaaaagtattaaccccttttatataaaatttgataaagtaggtttt
tttaaaggtaataaagacatgagagtattgtgggtaggtacagaagaaaatccttttctt
aataaattgcatgacaatatagatgaggaattgcataaaattggatttaaaaaagatgag
agaaaatttacttcccacattaccattgccagagatatacgtttaaacattggaatagaa
gaagtaaataatctttttgaaaaacaaaagaaaaatgatattttggtcgatacagttttt
ttgtatgagagtgttatacaagaaaatagaagaaaatatattcctatatttagtgtgctt
ttaaaataa
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