Thermoanaerobacter italicus: Thit_1939
Help
Entry
Thit_1939 CDS
T01178
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tit
Thermoanaerobacter italicus
Brite
KEGG Orthology (KO) [BR:
tit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tit03016
]
Thit_1939
Enzymes [BR:
tit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Thit_1939
Transfer RNA biogenesis [BR:
tit03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Thit_1939
Prokaryotic type
Thit_1939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF2505
Motif
Other DBs
NCBI-ProteinID:
ADD03174
UniProt:
D3T4M2
LinkDB
All DBs
Position
complement(1993400..1994122)
Genome browser
AA seq
240 aa
AA seq
DB search
MIVVQYDGTNYHGWQLQKNAITVQEVLQKAIKKVTGEEVNLIGASRTDTGVHALYQVANF
KTNTKMPAEKLPYALNSVLPDDIVITQAKDVEDSFHARYSAKRKRYKYIILNRKFRMPTM
RNYCWHISYPLNVEKMKKAATYLIGTHDFSAFKASGSSKTSTIRTVYDLIIEKNEDFINI
EIEADGFLYNMVRIIVGTLSYVGLGKIGENEVYHILASKDRTKAGITAPPQGLYLIKIIY
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgattgtagtacaatatgacgggaccaattatcatggttggcaattacaaaagaatgca
ataacagtccaggaagtattgcaaaaggcaataaagaaagtaacaggagaagaagttaat
ttaattggggcaagtagaactgatacgggtgtccatgctctataccaagtagctaacttt
aaaactaatactaaaatgcctgcagaaaaactgccctacgctctaaacagtgtattaccc
gacgatatagtaattacacaagcaaaagatgttgaagattcttttcacgcccgatatagt
gcaaaaaggaaaagatacaaatacattattctcaataggaaatttcgaatgcctacaatg
agaaattactgttggcatataagctatcctttaaatgtagaaaaaatgaaaaaagcagca
acttacttaattggcactcatgatttttctgcttttaaagcttcaggaagtagtaagaca
agtacaataagaacagtgtatgacttaattatcgaaaaaaatgaggattttatcaacatt
gaaatagaagccgatggttttttgtataatatggtgcgaataattgtagggacactgtct
tatgttggccttggcaaaataggggaaaatgaagtttatcacattttagcatcgaaagac
aggacaaaagcgggcataactgctcctcctcaaggattgtatttaataaaaattatctat
tga
DBGET
integrated database retrieval system
