Tissierella sp. MB52-C2: RBU61_00220
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Entry
RBU61_00220 CDS
T09678
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
tiz
Tissierella sp. MB52-C2
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GFIT
Motif
Pfam:
LysM
LysM2_NFP
LysM_RLK
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
WMM25116
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Position
45162..47096
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AA seq
644 aa
AA seq
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MSNNRTCPTGSFSYTIKSGDTLYKLAMTYNTTVDAIMRLNPGINPNNLQIGQRICIPEKT
TPPRQCPTGSFSYTIKSGDTLFKLAMTYNTTVDAIMRLNPGINPNNLQIGQVICIPSTTS
PRPCPTGSFSYTIKSGDTLYKLAITYNTTVEAIMAINPGINPNNLQIGQVICIPSTTPPK
QCPTGSFPYTIKSGDTLYKLAITYNTTVEAIMAINPGINPNNLQIGQVICIPSTTPPKQC
PTGSFPYTIKSGDTLYKLAITYNTTVEAIIAINPGIDPNNLQIGQVICIPSTTPPKQCPT
GSFPYTIKSGDTLYKLAITYNTTVEAIIAINPGIDPNNLQIGQVICIPSTTPPKQCPTGS
FPYTIKSGDTLYKLAITYNTTVEAIIAINPGIDPNNLQIGQVICIPSTTPRPCPTGSFPY
TIRPGDTLFDLARTFNTTVEAIIAINPGIDPNNLQIGQVICIPNASPMPPCPPCNGVYYT
VRSGDTLYSIAMMFNVSLQALMAANPGVDPNNLMVGQLICIPRGEVLCPGGTMHTVTPGE
SATDIMLRYNISWMTLTDANPNVDFNNLRVGQEVCIMPHKEMGCPCTPGYKQYKIDKFDI
PSTGSVIAALARKFNTTIAELLMANPTLSPGDFVEGKIICVPRM
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataatagaacatgtccaacaggaagcttttcctatacgataaaatcgggagat
acattatataagttggcaatgacttataatacaacagtggatgcaattatgaggctaaat
ccaggaattaatcctaataatctacaaatagggcaaagaatctgtataccagaaaaaaca
acaccaccaagacaatgtccaacaggaagcttttcctatacgataaaatcaggagataca
ttatttaagttggcaatgacttataatacaacagtggatgcaattatgaggctaaatcca
ggaattaatcctaataatctacagataggtcaagtaatctgtatacctagcacaacatca
ccaagaccatgtccaacaggaagcttttcctatacgataaaatcgggagatacattatat
aagttggcaataacttataatacaacagtagaggcaataatggcaataaatccaggaatt
aatcctaataacctacagataggtcaagtaatctgtatacctagcacaacaccaccaaaa
caatgtccgacaggaagttttccatatacgataaaatcaggagatacattatataagttg
gcaataacttacaatacaacagtagaggcaataatggcaataaatccaggaattaatcct
aataacctacagataggtcaagtaatctgtatacctagcacaacaccaccaaaacaatgt
ccgacaggaagttttccatatacgataaaatcaggagatacattatataagttggcaata
acttacaatacaacagtagaagcaataatagcaataaatccaggaattgatcctaataat
ctacagataggtcaagtaatctgtatccctagcacaacaccaccaaaacaatgtccgaca
ggaagtttcccatatacgataaaatcaggagatacattatataagttggcaataacttac
aatacaacagtagaagcaataatagcaataaacccaggaattgatcctaataatctacag
ataggtcaagtaatatgtatccctagcacaacaccaccaaaacaatgtccgacaggaagt
ttcccatatacgataaaatcaggagatacattatataagttggcaataacttacaataca
actgtagaggcaataatagcaataaatccaggaattgatcctaataatctacagataggt
caagtgatctgtatccctagcacaacaccaagaccatgtccaacaggaagtttcccatat
accataagaccaggagatacattatttgatttagcaaggactttcaatacaacagtagag
gcaataatagcaataaatccaggaattgatcctaacaatttacaaataggtcaagtaatc
tgtatacctaatgcatcacctatgcctccatgtcctccatgtaatggggtatactataca
gtgagatcaggagatactctatatagcatagctatgatgttcaatgtatctttacaagca
ttgatggcagcaaatccgggagttgatccaaataacttaatggtaggtcaattaatctgt
atccctaggggagaagtactttgcccaggtggaacaatgcatacagttacacctggagag
tcggcaacagatataatgttaagatataatatttcatggatgactttaacagatgccaat
ccaaacgtagacttcaataacttaagagtaggtcaagaagtatgtataatgccacataag
gaaatgggatgtccttgtactccaggatataaacaatataaaatagataaatttgacata
ccatcaactggttctgtaatagcagcattagcacgaaagtttaatacaactattgcagaa
ttattaatggcaaatccaacactatcaccaggtgatttcgtagaaggaaaaataatctgt
gtaccaagaatgtaa
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