Tissierella sp. MB52-C2: RBU61_00725
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Entry
RBU61_00725 CDS
T09678
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
RBU61_00725
09124 Replication and repair
03420 Nucleotide excision repair
RBU61_00725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tiz03021
]
RBU61_00725
03036 Chromosome and associated proteins [BR:
tiz03036
]
RBU61_00725
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_00725
Enzymes [BR:
tiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
RBU61_00725
Transcription machinery [BR:
tiz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
RBU61_00725
Chromosome and associated proteins [BR:
tiz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
RBU61_00725
DNA repair and recombination proteins [BR:
tiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
RBU61_00725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
PDDEXK_1
VP9
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
WMM25215
UniProt:
A0AA51R192
LinkDB
All DBs
Position
151911..154238
Genome browser
AA seq
775 aa
AA seq
DB search
MSNLIKVSVRNLVEFVLRTGDIDNSFMSMSRAVEGTKAHQKVQNSYGSEYKKEVTLKHSV
YYDDFTIQLEGRADGILTLEDEIIIDEIKSTTKDLEDIKEDYNELHWAQAKCYGYIYCLQ
NELDIIHIQLTYFHIESEEKKIFKRKFTKEDLESFFLYLTDKYIEWASITFYWGGIRDNS
IKKLSFPFESYRKGQRELAVATYKTIEEGRKLFAQAPTGIGKTMSTLFPSIKAIGEGIGT
KIFYLTAKTITREVPIASTEIIIKKGLRAKVIVITAKEKICTNKEVKCNPRDCSFAKGHY
DRVNEAIMDIFENEDLITRDTIVSYGLKHKVCPFEFSLDISLWADIIICDYNYVFDPQVY
LKRFFENPNEDYIFLIDEAHNLVDRSREMFSTEINKSSILEIRDIFKEDYPPIYKALGKI
NSILNKVKKDLDIGFEYYQREEISDLYYPIKRVITVLEPWLMEEKKHTEYEKVLELYFNL
TTFIKISELYDDHYVTYIKEDTRDMIFKLYCVDSSYLLSEALERGRSSIFFSATLTPLDY
HMDLLGGKKDDYHIKLSSPFPRENLCLTIGNNISTKYKDRERTYIDIVRYIETFISCKTG
NYFVFFPSYIYMNNVYEILMERNEDINIIIQNNNMAEIEKEEFLLKFEEENNLVAFAVMG
GIFSEGIDLTGEKLIGAVVVGVGLPQISFENNIIKDYFDSNLGEGFEYAYVYPGMNKVLQ
SAGRVIRSPEDRGAILLIDDRYRTSRYKSLFPNEWMGFKNIRNDREMKKILEEFW
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatttaattaaggtatctgttagaaatttagtagaatttgttcttagaacagga
gatatagacaatagttttatgtctatgtctagagcagtagaaggaactaaagctcatcaa
aaggtacagaactcctatggtagtgaatataaaaaggaagtcacattaaaacatagtgtg
tattatgatgattttactattcaactagaaggtagagctgatggtattttaactttagaa
gatgaaataataatagatgagataaagagtacaactaaggatttagaagatattaaagaa
gattataatgaacttcactgggctcaggcaaagtgttatggttatatatattgtttacaa
aatgaattagatattatccatattcaacttacatattttcatatagaatcagaagaaaag
aaaatatttaaaagaaaatttactaaagaagatctagaaagtttttttctatacctaaca
gacaaatatatagaatgggctagcattacattttattggggagggattagagataattcc
ataaagaagttatcatttcccttcgaaagctatagaaaaggtcaaagagaattagcagtg
gccacatacaaaaccatagaagaaggaagaaagttatttgcccaagcacctacaggcata
ggaaaaaccatgtcaacattatttccctctattaaagccattggagaaggaattgggact
aagattttttatcttacggccaagaccataactcgagaagtaccaattgcttctacagaa
atcattataaaaaaaggtcttagggctaaggtaattgtaataacagctaaggaaaaaatt
tgtacaaataaagaggtaaaatgtaatcctagggattgtagctttgcaaagggtcactat
gatagggtaaatgaggctataatggatatatttgaaaatgaggatttaattactagggat
actatagtgtcttatggactaaagcataaagtctgtccctttgaattttccttagatatt
agtctttgggcagatataattatatgtgattataattatgtttttgatcctcaggtatat
ctaaaaagattctttgaaaatcccaatgaggattatatatttctaatagatgaggctcat
aacctagtggataggtcaagggaaatgttttctactgaaataaataaatctagtatcctt
gagataagagatatttttaaggaagattatccgcctatatataaggctttaggtaaaata
aatagtatattgaataaagtaaaaaaagatttagatataggatttgaatactatcagagg
gaagaaatctctgatctatactatcctataaaaagggtaataacagttcttgaaccttgg
cttatggaagagaaaaaacataccgaatatgaaaaggtactagaactttattttaactta
actacttttataaagattagtgaattatatgatgatcattatgtaacatatataaaagaa
gatactagagatatgatatttaaattatattgtgttgattcttcctatttactgagtgaa
gccttagagaggggaagaagcagtatatttttttcagctactttaactcccctagactat
catatggatttattaggaggaaaaaaggatgattatcatataaagcttagttcaccattt
ccaagggaaaatctatgtctaaccattggaaataatatatctacgaaatataaggatagg
gagagaacctatatagatatagtaagatatatagaaacctttatatcttgtaagacgggg
aattattttgtgttttttccatcttatatatatatgaataatgtttatgaaattttaatg
gaaagaaatgaagatataaatataattattcagaataataatatggctgaaatagaaaaa
gaagaatttctcttgaaatttgaggaagaaaataatcttgtggcctttgcagtaatgggt
ggaatattttctgaaggaattgatctaacaggagagaaactaataggagccgtagtagta
ggagttggtttgcctcaaatctcctttgaaaacaatattataaaagattattttgatagt
aatttaggtgaaggatttgaatatgcctatgtatatcctggtatgaataaagtgctgcaa
tcggcaggaagggtaatcagatctccagaggacagaggagctattttactcatagatgat
agatatagaacaagtagatataaatccctatttcccaacgaatggatgggatttaaaaat
ataagaaatgatagggagatgaaaaagattctagaggaattttggtga
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