Tissierella sp. MB52-C2: RBU61_03565
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Entry
RBU61_03565 CDS
T09678
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBU61_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_03565
Enzymes [BR:
tiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
RBU61_03565
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RBU61_03565
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF2124
FokI_cleav_dom
Motif
Other DBs
NCBI-ProteinID:
WMM25758
LinkDB
All DBs
Position
701737..702576
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AA seq
279 aa
AA seq
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MLNIGCHLSISKGYYNAALEAVSIGANTFQFFTRNPRGGKAKEIDMEDINRLKDLMNEYK
FAPLFAHGAYTMNLCSDKEGTREFANIILKDDLERLKIIPNTYYVFHPGSHVGQGSEKGI
EFIVDALNNVIDEDNDTVILLEGMSGKGTEIGRNMEELKSIIDGVKYNKNLGICIDTCHL
YSAGYDIVNNLDGVLKEIDKTIGINRIKAVHLNDSKVDFASNKDRHEVIGEGTIGFDAIV
NVINHPLLKDLPFNLETPNELAGYKKEIEILRREYKWKD
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatattggttgtcatttatccatttcaaagggatattataatgctgcattagaa
gcagtatccataggagctaatacatttcaattttttactagaaaccctagggggggaaag
gcaaaggaaattgatatggaagatataaatagacttaaagatttaatgaatgagtataaa
tttgcaccactttttgcccatggagcctatacgatgaatctgtgttcagataaagaagga
actagagagtttgcaaatattattttaaaagatgatttggaaagactaaaaataattcca
aatacttattatgtattccatccaggttcccatgtaggacaaggtagtgaaaaaggtata
gaatttatcgtagatgctttaaataatgtcatagatgaagataatgatacagtaatttta
ttggaaggaatgtcaggtaaaggaacagaaataggaagaaatatggaagaacttaaatct
ataatagatggtgtaaaatacaataaaaatcttggaatatgtatagatacctgtcattta
tattcagctggatatgatatagttaataatttggatggtgtgttgaaggaaatagataag
acaataggtataaatagaattaaggcagtacatcttaatgatagtaaagtagattttgct
tctaataaagatagacatgaagtcataggagagggaaccataggttttgatgctatagta
aacgtaattaaccatccattattaaaggacttaccttttaatttagaaactccaaatgag
ttagctggatataagaaggaaattgaaattcttagaagggaatataaatggaaggattaa
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