Tissierella sp. MB52-C2: RBU61_03785
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Entry
RBU61_03785 CDS
T09678
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz02020
Two-component system
tiz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RBU61_03785 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RBU61_03785 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tiz03021
]
RBU61_03785 (rpoN)
Transcription machinery [BR:
tiz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RBU61_03785 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
HTH_3
HTH_26
DUF6042
HTH_31
Arg_repressor
AAA_6
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WMM25799
UniProt:
A0AA51R404
LinkDB
All DBs
Position
750158..751534
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AA seq
458 aa
AA seq
DB search
MRLSYDLILEQSQKLIMTPELRQAIELLQFNSLELKEYITNELEENPMLEPAGTNEEFEN
LDKYKDDNDIDWKEYLEKYDDISYRPQVDKNIKEYNYESFVSHGPTLREHLISQLNLTSL
ESKEHKIGENIIYNIDENGYLKSSLEEIASFMKSDIEEVRKLLDIIQTFEPIGVGARDLK
ECLLIQLRDIKDVHPCAAIIIKDYLEDIGYNRIQKISKELNLELIEVQEVCDYIKTLEPK
PGRTFRGEGGDARYITPDAEIKLVDGEFIVIINDSTGPKLNINNYYKELMKSGGDKDTID
FLNEKFNSAMWVIRSIEQRKSTIRKVIESILKFQMDFFIEGEKSLKSLTLKDVAEDVEMH
ESTISRATNGKYVQTPRGLFELKYFFSSGILSEDGDMSSTSIKVTLKEIIDNENNKKPYS
DQKISELLKEQGINISRRTVAKYRDELNIPSSSMRRRY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttagctatgatttgatccttgaacaatctcaaaagttaataatgactccagaa
ttaagacaagctatagaattattacagttcaatagtttagaattaaaagaatatattacc
aatgagttagaagaaaaccctatgcttgaaccagcaggtactaatgaagaatttgaaaac
ctagataaatataaagatgataacgacatagactggaaagaatatttagaaaagtatgac
gatattagttataggccacaagtagataaaaatataaaagaatataactatgaatctttt
gtaagccatggacctacattaagggaacatctaatatcacaactaaatcttacttcgttg
gaaagcaaagaacataagattggagaaaatattatatataatatagatgaaaatgggtat
ttaaaatcttctttagaagaaattgcaagttttatgaaatcagatatagaagaggttaga
aaactattagatattatacaaacctttgagcctattggagtaggtgctagagatttaaaa
gaatgtttattaatccaattaagagatataaaagatgttcatccctgtgctgcaataata
attaaagattatttagaagatattggatataatagaattcaaaaaatctccaaggaatta
aaccttgagcttatagaagtacaagaagtttgtgattatataaaaactttggagcctaaa
ccaggtaggacttttagaggagaaggcggagatgcaagatatataacaccagatgctgaa
attaaacttgtagatggagaatttattgttataataaatgattctacaggccctaagctt
aatataaacaactattataaagaacttatgaaatcaggcggagataaagataccatagat
tttcttaacgaaaaatttaattctgcaatgtgggtaattagaagtatagaacagagaaag
tcaactattagaaaagtaatagagtccatattaaagttccaaatggatttttttatagaa
ggagaaaaatcactaaaatctctaacattaaaagatgtggcagaagatgtggagatgcat
gagtctaccatatctagagccacaaatggtaaatatgttcaaactcctagaggattattt
gaattaaaatattttttctcatctggtatattaagtgaagatggtgatatgtcatctaca
agtataaaagttactttgaaggaaatcatagataatgaaaacaataaaaagccatatagt
gatcaaaaaatatctgagctgctaaaggaacaaggaataaatatctcaaggagaactgtt
gcaaaatacagagatgaattaaatataccctcttcatcaatgaggagaagatattaa
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