Tissierella sp. MB52-C2: RBU61_04785
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Entry
RBU61_04785 CDS
T09678
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03030
DNA replication
tiz03430
Mismatch repair
tiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBU61_04785
03430 Mismatch repair
RBU61_04785
03440 Homologous recombination
RBU61_04785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tiz03032
]
RBU61_04785
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_04785
Enzymes [BR:
tiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBU61_04785
DNA replication proteins [BR:
tiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBU61_04785
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBU61_04785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
WMM25993
UniProt:
A0AA51R9K4
LinkDB
All DBs
Position
972300..975773
Genome browser
AA seq
1157 aa
AA seq
DB search
MNYKDKFVHLHVHTEYSLLDGSIRMRDLISRTKDLGMESIAITDHGSMFGVIQFYKEAKK
QGIKPILGSEVYVAMNKYTEKEPKDKSQYHLVLLAENNEGYENLMKIVSEAYINGFYYKP
RIDHDILRRYSKGIIALSACLGGEVQKHIMNNNIDKAKEIALTYREIFGSNNFFLELQDH
GIEEQRRVNRELIKISKEMDIGLVATNDVHYLKKEDAEVHDVLLCVQTASTVDETDRMKF
PTNEFYLKSPEEMRNIFGDTLEALENTALIADRCDVELDFDTLHLPEYEVPEGYTNVDYL
KHLILEGMKERYKIITEEIEDRFNYEFNTIVEMGYTDYFLIVWDFIKFARDNGIMVGPGR
GSAAGSIVSYALGIIDIDPLEYGLIFERFLNPERVSMPDIDIDFCYERREEVIQYVIDKY
GVDHVAQIVTFGTMAARGSIRDVGRAMNMPYGEVDYIAKQIPMELGMTISKALEVNKSLK
DAYDEDENVQRLIDVSKAVEGLPRHTSTHAAGVVISKNPVTSYVPLLKNGDSVATQFNMI
ELEELGLLKMDFLGLRTLTVIRDTVNLVEENHGVKIDFNKINYEDPLVLEMFAKAETLGI
FQFESPGMRAFLRELKPNVFENLIAANSLFRPGPMNQIPTFVACKHDASKIEYLHPKLEH
ILDVTYGCIVYQEQVMQIVRDIGGYSMGRADLVRRAMGKKKMDVMEEERRNFIYGQVDEN
GEVILSGAIRNGVDEKTASKIYDLMIDFANYAFNKSHSAAYAVVAYRTAYLKYYYPVEFM
AALISSVMGNTNQVSLYIQECKRLGIDILSPDINESYNKFTVSQNKIRFGLSAVKNVGEN
FIKAIVEARKSGRFKSFTDFIERIEKTDSSVMNKRAVESLIKCGAMDSLGVNRAQLLAIY
EKTIDGIHADRKRNIEGQFSIFDTLDENVSKDNLPDLKEFPKNILLTMEKEMVGIYISGH
PLESYKSEIERVSNITTFDLLNINEEIGKDLNGVKDGASIILGGIIVEKKNKITRNNNMM
AFITLEDLYGSIECIVFPATFERYNKYLKEDNIIVIHGRISISEVEEPKIIVEKISELNT
YKKGKIYVKIPSNNSSDTFDKLKRILIKYTGDTPVYVYIEKEKKTVVADRSLWIDIDNKN
AIIELKNLLGENSVKIS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgaattataaagataaatttgtccatttacacgtgcatactgaatatagtttattggat
gggtctattaggatgagagatttaatctctagaactaaagatttaggtatggaatccatt
gctataactgatcatggctctatgtttggagttattcaattctataaggaagccaagaag
cagggaattaaaccaatacttggctctgaagtttatgtagctatgaataaatatactgaa
aaagagccaaaggataagagccaatatcatttagtacttttagcagaaaacaatgaaggt
tatgaaaacttaatgaaaatagtttctgaagcttatataaatggattttattataagcct
aggatagatcacgatatacttagaaggtatagtaaaggaattatcgctttatcagcttgt
cttggaggagaagtacaaaagcatataatgaataataatatagataaagcaaaagaaata
gccttaacatatagagagatttttggttcaaataactttttccttgaactgcaagatcat
gggattgaagaacaaagaagggtaaatagagaactaataaaaatatctaaggaaatggat
ataggattagttgctacaaatgatgtgcattatttaaaaaaagaagatgctgaagtccat
gatgttttattatgtgtacaaacggcaagtacagtagatgaaacagatagaatgaagttt
ccaacaaatgaattttatttaaaatcaccagaagaaatgagaaatatctttggagatact
ttagaagctttagaaaacactgcattgattgcagatagatgtgatgtagagctagatttt
gatacattacatttacctgagtatgaggtgccagagggctatacaaatgtggattattta
aaacatcttattttagagggaatgaaggaaagatataagattattaccgaggaaatagag
gatagatttaattatgagtttaataccatagttgaaatgggatatacagactatttcctt
atagtatgggattttataaaatttgctagagataacggaataatggtagggccaggaaga
ggttcagcagcagggagtattgtctcctatgccttaggtattatagatatagacccctta
gaatatggtctgatatttgaaagatttttaaatccagagagagtatctatgccagatata
gacatagatttttgttatgaaagacgagaagaagttattcaatacgttatagacaaatat
ggagtagaccatgtggctcaaatagtcacctttggtactatggcggctaggggttccata
agggatgtaggaagagcaatgaatatgccctacggcgaagtagattatattgcaaaacaa
ataccaatggaattaggtatgacgatatcgaaggccttagaggtaaataaatcattaaaa
gatgcctatgatgaagacgaaaatgttcaaagacttatagatgtatctaaagcagtagag
ggattacctagacatacatctacccatgctgctggagtagttatatctaaaaatcctgtg
acaagttatgttcctctattaaaaaatggagattctgtggctactcaatttaatatgata
gaattagaagaattaggtcttttaaaaatggactttttaggtctaagaacattaacggta
attagagatacagttaatttagtagaagaaaatcatggagtaaaaattgattttaataag
ataaactatgaagatccacttgtacttgaaatgtttgccaaggctgagactctaggtata
tttcagtttgagtctccaggaatgagggcgtttcttagggaattaaagccaaatgtattt
gaaaaccttatagctgccaattctctttttagaccagggcctatgaatcagatacctaca
tttgtggcttgtaaacatgatgcatcaaagatagaatatcttcatcctaaactagagcat
atactagatgttacatatggatgtatagtatatcaggagcaggtaatgcaaatagttaga
gatattggtggatattctatgggtagagcagatttagtaagacgtgccatgggaaaaaag
aaaatggatgtaatggaagaagaaagaaggaactttatctatggtcaagtcgacgaaaat
ggagaagttattttatcgggagccataagaaatggagtagatgaaaaaacagcttcaaaa
atttatgacttgatgatagactttgccaactatgcctttaataaaagccattcagctgcc
tatgcagtagtagcctatagaactgcatatttaaaatattattatccagtggaatttatg
gcagctcttatttcttctgttatggggaatactaaccaagtatcactttatatacaggag
tgtaaaaggcttggaatagacatactttcacctgatataaatgaatcctacaataaattt
actgtgtcacaaaataagattagatttggactttcagcagtaaaaaatgtaggagaaaac
tttataaaggccatagtagaagctagaaaatcaggaagatttaaatcttttacagatttt
attgagagaatagaaaagacagattcatctgtaatgaataaaagggcagtagaatccttg
attaaatgtggtgctatggatagtctaggagtcaatagggcacaattattggcaatatat
gaaaagacaatagatggtattcatgcagatagaaagaggaatatagaggggcagttttcc
atatttgatactttagatgaaaatgtttcaaaagacaatttgccagatttaaaagaattt
cctaaaaacatactgcttacaatggagaaggaaatggtaggtatttatatatcaggtcac
ccattggaatcatataaatctgaaatagaaagggtatcaaatattacaacctttgattta
ttaaatataaatgaagaaataggtaaagatttaaatggagtaaaagatggggcatccata
atattaggtggtataattgttgaaaagaaaaataaaataactagaaataataatatgatg
gcatttattacattggaagatttatatggttcaatcgaatgtatagtttttcctgctacc
tttgaaagatataataaatatttaaaagaagacaatataatagtaatccatggtagaata
agtatatctgaggtggaagaacctaaaataatagttgaaaaaatatctgaactaaatact
tataaaaaaggcaagatatatgtaaagataccatcaaataattcttcagacacttttgat
aagcttaaaaggattctaataaaatatactggagatacaccggtatatgtatatattgaa
aaggaaaagaaaacagttgtggcagatagaagtctatggatcgatatagataataaaaat
gcaataatagaattgaaaaatttgcttggagaaaattcagttaaaatatcttaa
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