Tissierella sp. MB52-C2: RBU61_04935
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Entry
RBU61_04935 CDS
T09678
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tiz
Tissierella sp. MB52-C2
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tiz03009
]
RBU61_04935 (rlmD)
Enzymes [BR:
tiz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RBU61_04935 (rlmD)
Ribosome biogenesis [BR:
tiz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RBU61_04935 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
TRM5-TYW2_MTfase
TRAM
Methyltransf_11
PrmA
PCMT
Methyltransf_4
DOT1
RrnaAD
TehB
Ubie_methyltran
N6_N4_Mtase
UPF0020
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
WMM26022
UniProt:
A0AA51R946
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All DBs
Position
1007355..1008704
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AA seq
449 aa
AA seq
DB search
MDRIVGDRFEGKIIDFTHEGNGVLKVDNFAIFVSGGLIGDKVVGKIDEVKKNFAIGSITN
IIEPSEDRITLDFNIEEARGGIPLVEYKYSKQLGWKRNKVKMDLAKIAGLADVEVKDTIG
MDNPYGYRNHVQIPVGEKNGKTIIGFYEQNTNDIVNMSGSILQPEIGNKIIKIIRSWMDK
FHIKPYNKKTKKGIIRHIGIRINKDNKSMVILVTGSDKIPYEKELIDMLIDENVISIYQN
INKLNSSPTYGKEYRKIYGEDKLLDYIGEYEFYLSPNSFFQINRIQAEVVYNKAMEYLNI
DKDDIIYDLYCGIGTISLYMAKEAKKIYGVEVVKKAIEDAKENAKLNNIDNVEFIVGKAE
EVFPQLMDKGIKGNKVVVDPPRKGCEKEVIEAIIKLSPEKVVYVSCNSATMARDVKCLVE
NGYKVEEVQPVDMFPHTGHVECVVKLEKQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggataggattgtaggagatagatttgaaggcaaaataattgactttacccatgaaggt
aatggagtattaaaagttgataattttgcaatttttgtttctggtggattgattggtgat
aaagtagtgggtaaaatagatgaggttaaaaagaattttgccataggatcaataactaat
attatagaaccttctgaagatagaataacactagatttcaatatagaagaagcaagggga
ggaatacctcttgttgaatataaatattctaagcagttagggtggaaaaggaataaggta
aagatggatcttgccaagattgcaggattagcggatgtagaggtaaaggatactatcggt
atggataacccctatggatatagaaatcatgttcaaataccagtaggtgaaaaaaatgga
aaaacaattattggattttatgaacaaaatactaatgacatagtcaatatgagtggaagt
atacttcaacctgaaataggaaataagataataaaaataattagatcttggatggataaa
ttccatataaaaccttataataaaaaaactaaaaaaggaattattcgacatataggtata
agaattaataaagataacaagtccatggtaattttagtaacaggtagtgataaaatacct
tatgagaaagaattaatagatatgttaatagacgagaacgttataagtatctatcaaaat
ataaataaattaaactcatctcctacatatggaaaagaatatagaaaaatttatggagaa
gataaattattagattatataggagagtacgaattttatctatcacctaactcattcttc
caaataaataggattcaagcagaagtagtatacaataaggctatggagtacttaaatata
gataaagatgatattatctatgatttatattgtggaataggaaccatctctttgtatatg
gcaaaagaagctaagaaaatatatggtgtggaagtagtaaagaaagccatagaagatgct
aaggaaaatgcaaaattaaacaatatagataatgttgaatttatagtaggaaaagcagaa
gaagtatttccacaattaatggataaaggaataaagggtaacaaggtagtagttgatcca
cctagaaaaggctgcgaaaaagaagttatagaagccattataaaattaagtccagagaaa
gttgtatatgtgtcctgtaattctgctactatggctagagatgtgaaatgtttggtggag
aatggatataaggtggaggaagtgcagccggtggatatgtttccgcatactgggcatgtg
gagtgcgtggttaagcttgaaaagcaatga
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