Tissierella sp. MB52-C2: RBU61_05450
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Entry
RBU61_05450 CDS
T09678
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBU61_05450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tiz03019
]
RBU61_05450
03009 Ribosome biogenesis [BR:
tiz03009
]
RBU61_05450
Enzymes [BR:
tiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBU61_05450
Messenger RNA biogenesis [BR:
tiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBU61_05450
Ribosome biogenesis [BR:
tiz03009
]
Prokaryotic type
rRNA helicases
RBU61_05450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_C_2
SBF_like
Motif
Other DBs
NCBI-ProteinID:
WMM26120
UniProt:
A0AA51MXH0
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All DBs
Position
1114188..1115741
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AA seq
517 aa
AA seq
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MGVDILHLSNIYLYIKWYHIVYNIQMNRLKKERVDILDKKNFKDYSLSDEILKSVDLLGY
KNLTKVQEETLPIILKGKDLVVKSQTGSGKTAAFAVPICESIYWDERSPQALVIVPTREL
AMQVREEFFHIGRFKRLKIVEVYGKAPYGRQERELKERVHVVVGTPGRIIDHLERGNLRV
DKIKYLVLDESDEMLNMGFLEQVENIIEKLPEERVNLLFSATMPEDIEELSKKYMNDPSY
IEIESSSNTLDRIEQVRYNVEGIEKIELLKDITVVENPDNCIIFCNTRDDVNFVYDALMD
ENYSCNKIHGGMEQRDRTEVMEDFKMGKFRFLVATDVAARGIDVEDITHVINYDIPREVE
PYIHRIGRTARKGKTGKAILLHDNYEEKYLKDILEYMERDIKLVEPLTEEEVEKNYTSFR
NKMNEEREDIQIKGESLNEGILKLHINAGKKTKMRAGDVVGAICSIDGVNVEDIGIINII
DVSTFVEILNNKGDMVYKALQNTKIKGRVRNISIAIR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggggtagatattttacatctatctaatatttatctatatattaaatggtaccatata
gtatataatatacagatgaatagattgaaaaaagaaagagttgatatattggataagaaa
aattttaaagattatagtcttagtgatgagattttaaaatctgttgatttattaggatac
aagaatttgacaaaagtacaagaagaaacattacctataatattaaaaggtaaagactta
gttgtaaaatcacaaacaggaagtggaaaaactgctgcatttgcagttcccatatgtgag
tctatatattgggatgaaagaagcccacaagcattagtaatagttccaacgagagaactt
gcaatgcaagtaagagaagaattttttcatataggtagatttaaaagattaaaaatagta
gaagtttatggaaaagctccatatggaagacaagaaagagaattaaaagaaagagttcat
gtggtagtaggaacaccaggacgtataatagatcatttagaaagaggaaatttaagagta
gataaaatcaaatatttagtattagatgaatctgatgaaatgttaaatatgggattttta
gaacaagttgaaaatataattgaaaaattaccagaagaaagagtaaatttattattttca
gccacaatgccagaagatatagaagaactttctaaaaaatatatgaatgaccccagttat
atagaaatagaatctagtagcaatactttagatagaatagaacaagtaagatataatgtg
gaaggtattgaaaaaatagagttattaaaagatataacagtagttgaaaatccagataat
tgtattatattttgtaatactcgtgatgatgtaaactttgtatatgatgctctaatggat
gaaaattattcttgtaataaaatccatggaggaatggaacaaagagatagaacagaagta
atggaagattttaagatgggtaagtttagatttttagttgcaacagatgttgctgcaagg
ggaatagatgttgaagatataacccatgtaataaattacgatattccaagagaagttgaa
ccatatattcataggataggaagaactgctcgtaaagggaagactggaaaggctatatta
cttcatgataactatgaagaaaagtatttaaaagatattttagagtatatggaaagagat
attaaattagtagagccactaactgaagaagaagtagaaaagaattatacatcttttaga
aataaaatgaatgaagaaagagaagatattcaaataaaaggtgaaagtttaaatgaggga
attttaaaacttcatataaatgccggaaagaaaactaaaatgagagctggagatgtggtt
ggtgcaatttgtagtatagatggagtaaatgttgaagatataggtattataaatattata
gatgtatcaacatttgttgaaattttaaataataaaggtgatatggtttataaagctcta
caaaatactaagataaaaggtagagttagaaacattagtattgcaataagatag
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