Tissierella sp. MB52-C2: RBU61_09150
Help
Entry
RBU61_09150 CDS
T09678
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03410
Base excision repair
tiz03430
Mismatch repair
tiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBU61_09150 (recJ)
03430 Mismatch repair
RBU61_09150 (recJ)
03440 Homologous recombination
RBU61_09150 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_09150 (recJ)
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RBU61_09150 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RBU61_09150 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RBU61_09150 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ADH_zinc_N
CSN11_C
Motif
Other DBs
NCBI-ProteinID:
WMM26831
LinkDB
All DBs
Position
complement(1820029..1821798)
Genome browser
AA seq
589 aa
AA seq
DB search
MEKWFIRNKSADYKKIAAHFKISEFLAKLLVNRDINDYRLIDSFISSNLDKLHNPKTMKD
LSKGANILKDKIINKNTIRIVGDYDVDGVISIYLLYTAIKQCGGDVDYVIPNRVDDGYGI
NNEIVRQAKEQGIDTIITCDNGIAAIEQVKLAKELGLTVIVTDHHDLPFIVDESGERVYL
SLDADAVINPKQQDCSYAFERLCGAAVVFKLIQELYSLFNIPIEATYDLLEYTAIATICD
VVDLVDENRIIVKKGLELINRSQNIGLKALIRETGIGNKEIGIYHIGFVIGPSINASGRL
DSALKSLELLLCEDEELATILAKELRELNEERKQMTVEGVEKIINTIEHSDIKNDKVLVI
YEPEVHESIAGIIAGRIKDRFNKPTIVLTNGKEGIKGSGRSIEGYNMFEELSECKDILLR
FGGHPMAAGLSLEYENIHILREKLNYNIKLTDEDLIPRVYIDMHLPLEYINFKLIDELKL
LEPFGKGNNKPIFGEKSLKINRGFRLGANRNVLKLILESKTKSVMESIYFGDIDSFEKLI
ITNYGANELEKIYRGIDNDINIDILYYPSINEYNGKTNIQITIQSYRIG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaatggtttatacgaaataagtcagctgattataaaaagattgcagctcatttt
aaaatatctgagtttttagctaaactattagttaatagagatataaatgattatagatta
atagatagttttatatcatcaaacttagataaattacataatcctaagacaatgaaggat
ttatctaagggtgctaatattcttaaagataaaataataaataaaaataccattagaata
gtaggagattatgatgtagatggagtaatctccatttacttattatatactgcaataaaa
caatgtggcggagatgtagattatgttattccaaatagagttgatgatggatatggtata
aataatgaaattgtgaggcaagcaaaggaacaaggaatagacactataataacttgtgac
aatggtatagcggctatagagcaggtgaaattggctaaggaattgggtttaactgtgatt
gtgacagaccatcacgatttacccttcatagtggatgaatcaggagaaagagtatactta
tctttagatgctgatgcagtaataaatccaaaacaacaggattgttcctatgcctttgaa
agactttgcggtgctgcagttgtatttaaactaatacaagaattatattctttatttaat
attcccatagaagccacatatgacttgttagaatatactgcaatagcaacaatttgcgat
gtggtcgacttagttgatgagaataggattatagtaaaaaaaggcttggagctcataaat
cgaagtcaaaacattggtttaaaggctttaataagagagacaggaataggaaacaaagaa
attggaatctatcatataggatttgtaatagggcctagtatcaatgcatcaggaagatta
gattcagctctaaaatctttagaattacttttatgtgaagatgaagaattggctactata
ctggctaaagaacttcgagaactaaatgaagaaagaaagcaaatgaccgtagaaggtgta
gaaaagataattaatacaattgaacattctgatataaagaatgacaaggtattggttatt
tatgaaccagaagtccatgaaagtatagctggtataattgcaggaagaattaaagataga
tttaataaacctacaatagtattaaccaatggaaaagaaggaataaaaggatccggaagg
tccatagaaggatataatatgtttgaggagttatcggaatgtaaagatatattattgaga
tttggtggacatcctatggcagcaggattatccctagagtatgaaaacattcatattctt
agagaaaaattaaattataatataaaattaacagatgaagatttaataccaagggtatat
attgatatgcatcttccactggaatatattaactttaaattaattgatgaactaaagctt
ttagaaccctttggaaagggcaataataaacctatatttggtgaaaaaagtctaaaaata
aatagaggatttagattaggtgcaaatagaaacgttctaaaattaatattagagagtaaa
actaaatctgttatggaatctatttattttggagacatagacagttttgaaaaattaata
attacaaactatggagcaaatgaacttgaaaagatatataggggtatagataatgatata
aatatagatattctatattatccttccatcaatgaatataatggaaaaactaatatacag
attacaattcaaagttatagaattggctaa
DBGET
integrated database retrieval system
