Tissierella sp. MB52-C2: RBU61_11205
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Entry
RBU61_11205 CDS
T09678
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03030
DNA replication
tiz03430
Mismatch repair
tiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RBU61_11205 (holA)
03430 Mismatch repair
RBU61_11205 (holA)
03440 Homologous recombination
RBU61_11205 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tiz03032
]
RBU61_11205 (holA)
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_11205 (holA)
Enzymes [BR:
tiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RBU61_11205 (holA)
DNA replication proteins [BR:
tiz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RBU61_11205 (holA)
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RBU61_11205 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
ING
Motif
Other DBs
NCBI-ProteinID:
WMM23521
UniProt:
A0AA51R3V8
LinkDB
All DBs
Position
complement(2238950..2239981)
Genome browser
AA seq
343 aa
AA seq
DB search
MNYNEFMSCIKKDNILPVYFLSGNEEYLMKDAVEALKDKYIDKSFEALNYIIIDGKEKSF
DDILNACETLPFMSEKKLVVIKDISEIMESNLNELDKTLSSYVENLDSYLCLIIMDRSNN
FKKTTKLYKTINKLGGVVEFNSLKGRELNTWVENKFKKNNKKISASNISYFIGQSSYSDY
NSIKTLYDLENELTKVVDYTSNNEVSKEDIDLVLTKTLDTNIFNLLGSINKRDSEEALKI
FNEMYIAGEPVQKILSMIIRQLRLTLGYKLYKEKGYTDGEIGDKLGIKPFELKKIGKESN
NFTEVQLNRALNYILELDIKQKTSSHDEKLALEMLIVNLSYGI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaattataatgaatttatgagctgtataaagaaagataatattcttcctgtatatttc
cttagtggaaatgaagaataccttatgaaggatgctgtggaagctttaaaagataaatat
attgataagtcctttgaagctttgaattatataattatagatggaaaagaaaagagtttt
gatgatatattaaatgcctgcgagactcttccattcatgtcagaaaagaaattagtagtt
ataaaagatattagcgaaatcatggaaagtaatttaaacgaattagataagacactaagc
tcatatgttgaaaacttggattcttatctttgtctaatcataatggacaggtctaacaac
tttaagaaaactactaaattatataagacgattaacaaattaggcggtgtagttgaattt
aatagtttaaagggcagagaattaaatacatgggtagagaataaatttaaaaagaataac
aaaaaaatatctgcttcaaatataagctattttataggacaatcaagctatagtgattat
aatagcataaagactctttatgatttagaaaatgagttaacaaaagtagtagattataca
tctaataatgaagtgagtaaagaagatatagatttggtactaactaaaactttagataca
aatatattcaatttattaggaagtataaataaaagagatagtgaagaagccttaaagatt
ttcaatgaaatgtatatagcaggtgaaccagttcaaaaaatcttatctatgattattaga
caattgagattaactttaggatataaactatataaagaaaaaggatataccgatggggaa
attggagacaaactagggattaaaccttttgagctaaaaaaaataggaaaagaatctaat
aattttactgaagtacagttaaatagagctctaaactatatattagaattagatataaaa
caaaagactagttctcacgatgaaaagctagcccttgaaatgcttattgttaatttatcc
tatggaatatag
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