Tissierella sp. MB52-C2: RBU61_11385
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Entry
RBU61_11385 CDS
T09678
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz00550
Peptidoglycan biosynthesis
tiz01100
Metabolic pathways
tiz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBU61_11385
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RBU61_11385
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tiz01011
]
RBU61_11385
Enzymes [BR:
tiz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RBU61_11385
Peptidoglycan biosynthesis and degradation proteins [BR:
tiz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RBU61_11385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DNA_pol3_beta
Motif
Other DBs
NCBI-ProteinID:
WMM23555
UniProt:
A0AA51MSN9
LinkDB
All DBs
Position
complement(2272860..2276108)
Genome browser
AA seq
1082 aa
AA seq
DB search
MNWLEKILNRYNIVTYIVIFLMFLLSFRLATLTIVKGDEYRDMADNKRLKEIYVSAPRGE
IRDRYGRLLAGNKPSFTVQLLKDELDIKDKDKKNEALLSLVRLLEEDGVSYIDDFPINLN
SFKYKAEKDYFEESLMPDDKVVDIIINHNLIGELLEASYIHQEYQEHYKFSIIEKAINAL
EDKDIEVTREGLMVGELVRLINNDKIIIRKIIDHPISRKLTYEILTKKNLAENIIMEEYS
LSYDEEYKEQKRNLMNSYPEVTAKTTGKQDFVNIVMKTSINNILEKVIEKENDKGKSEII
VPGKILLDMVLEKNPNVPIKIELSEDSSNVIYKYLGSDDIGDKSSTDILVEYGKKAGIME
EFITSDDIKTLAQEQLLNNGINPKISIAKDFEYVFINNKKRWYNENNIDEESTVREAFEA
LKEKYKISKELSSYEARSILTLYEVLNKQGHFAYQPINIAYGIKNSTVAKIEEGLSDLPG
IQVSIEPVRYYPEKSTAAHILGYLGKISQPNEIKKYVDENGYSPNDIIGKTGVEESFEDV
LRGENGIKRVEVDALGNTTNTLDEKSPVPGDNLYLTIDLKLQKLAESVLQQTLEKVQVGG
TYESPWGNYKFGTNRKKGRPYVNATSGAVVATNVKTGEVLAMASYPAYDPNLFSTGISNA
DWLSLFPEHDKDPLAPRPLYNIAIQTAVQPGSIFKMVTGLAGLEKGMSPTKAIRDMGYVQ
VGSYTPGCWIWNQSRGTHGYENLYDAIRDSCNYYFYTLALGRNQRTGENIGVKLELEDIV
DLSKQLGLNDKSGIEINIPAEVSGGVPDPQRKVITTKAMLKSELRGNIEKYIKEDTVLDQ
DTIQDIIEEIVSWTELEEPLSRGEVIRRLDAFGLEPEKKLLGKKEGLADRIKFSYLQQAG
WNISDTLNVTIGQGQNSYSPIQMANYIATISNGGYRHKATLVDNVKNYNNSKIILNNEPE
GERIALNNYENLDHIKKAMLAVSNDGSSRKIFGKFPVQVGSKTGTAQRGGVNPYTGDTYD
DFAWFVAFAPYEDPEIAVSVVLFQGGSGGYAGPMARDIIAEYLGLNAVGTKESLPFKNSL
SE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgaactggttggaaaagatacttaatagatataatattgtcacgtatatcgttattttt
cttatgtttcttttatcctttagattagccactttaactatcgtaaagggtgatgagtat
agggatatggcagataataaaagattaaaagaaatatatgtttctgcccctaggggagaa
ataagagatcgatatggaaggcttttagctgggaataaacctagttttactgtacagctt
ttaaaagatgaattagatataaaagataaagataaaaagaatgaggctctattatcttta
gtaagattattggaagaagacggagtttcctacatagatgatttcccaattaatttaaat
agctttaaatataaggctgaaaaagattattttgaggaaagcctaatgcctgatgataag
gtagtggatattataatcaaccacaaccttataggagaattacttgaagcttcatatatt
catcaggaatatcaagaacactacaagttttccataatagaaaaagctataaatgcttta
gaagataaagatatagaggttactagggaaggacttatggttggtgaactagtaaggttg
ataaataacgataaaataatcataagaaaaataatagaccacccaatttcaaggaaattg
acatatgaaatattaactaaaaagaatttagctgaaaatattattatggaagaatattcg
ttaagttatgatgaagaatataaggaacaaaaaaggaacttaatgaattcctatccagaa
gttacagctaagacaacgggtaaacaggactttgtcaacattgttatgaagacttccatt
aataatattttagaaaaggtaatagaaaaagaaaatgacaagggaaaatctgaaatcata
gtacctggaaaaatattgttggatatggttttagaaaagaatccaaatgtacctataaag
atagaattaagtgaagatagttctaatgtaatttataaatatttaggtagtgatgatata
ggagataaatcatcaacagatattttagtagaatacggtaaaaaagcaggtattatggaa
gaattcataactagtgatgatataaaaacattggcacaggaacaactattaaataatgga
ataaatccgaagatttccattgcaaaagattttgaatatgtctttatcaataacaagaaa
agatggtataatgagaataatatagatgaagaaagtacagttagggaagcctttgaggct
ttaaaagaaaaatataagatatctaaagagctaagtagttatgaggctaggtctatactt
acattatatgaagttctcaataaacaaggacattttgcatatcagccaataaatattgcc
tatggcataaagaattctacagtagcaaaaatagaagaaggattatctgatttacctggt
atacaggtttctatagaacctgttagatattatccagaaaaatctacagctgcccatata
ttggggtatttaggtaaaattagtcagcctaatgaaattaaaaagtatgtagatgaaaat
ggatattcccctaatgatattataggtaaaactggagttgaggaaagctttgaagacgtt
ttaaggggagagaatgggataaaaagagttgaagtagatgcacttggaaatacaactaat
actttagatgagaaaagcccagtaccaggagacaacctttatttaaccatagatttgaag
ttgcaaaaacttgcagaaagcgtattgcagcaaacgttagaaaaagttcaagttggtgga
acttatgaaagcccatggggcaattataaatttggtactaacagaaaaaagggtagacct
tatgtaaacgccacatctggtgcagtagtagctaccaatgttaaaactggtgaagtacta
gctatggctagttatcctgcttatgatccaaacttgttttcaacgggaatatctaatgca
gactggttaagtttatttccagaacatgataaagatcctttagcacctaggccattatat
aatatagcaattcaaactgctgtacaacctggttcaattttcaagatggtaactggatta
gctgggctagaaaagggtatgagccctactaaagccataagagatatgggatatgttcaa
gttggaagttatacccctggatgttggatttggaatcagagtaggggcacccatggatat
gagaacttatatgatgccatcagagattcatgtaactattatttttatacattagcctta
ggaagaaatcagagaaccggagaaaatataggggttaagcttgagcttgaagatatagta
gacttatctaaacaattaggattaaatgataaaagtggtatagaaataaatatacctgca
gaagtatcaggtggtgttcccgatccacaacgaaaagtaataactactaaagcaatgtta
aaatccgaattgcgtggaaatatagaaaaatatataaaagaagatactgtgttggaccaa
gatactattcaagatataatagaagagatagtaagctggacagagctagaagaaccatta
tctaggggagaagttattagaagactagatgcttttggattagagccagaaaagaagttg
ctaggaaaaaaagaaggactagctgatagaataaaatttagttatttacaacaagctgga
tggaatatatcagatactctaaatgtaactattggccagggtcaaaactcttatagtcct
attcagatggcaaattatatagctacaatatctaatggaggttatagacataaagcaacc
ttagtagataatgtgaaaaattataataattctaagattattcttaataacgagcctgaa
ggtgaaagaatagcattaaataactatgaaaacttggatcatataaaaaaagctatgtta
gcagtatcaaatgatggatcttctagaaaaatatttggtaaatttccagtacaagtaggc
tctaaaacaggtactgctcaaagaggaggggtaaacccttatactggggatacttatgat
gatttcgcatggtttgttgcctttgcaccttatgaagatcctgaaatagcagtatcagta
gtgttatttcaaggtggtagtggaggttatgcaggaccaatggcaagagatattattgca
gaatatctaggattaaatgcagttggaactaaggaatccctaccttttaaaaatagctta
tcagaataa
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