Tissierella sp. MB52-C2: RBU61_11540
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Entry
RBU61_11540 CDS
T09678
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBU61_11540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tiz02000
]
RBU61_11540
Transporters [BR:
tiz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RBU61_11540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WMM23585
UniProt:
A0AA51MSQ6
LinkDB
All DBs
Position
complement(2301374..2303113)
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AA seq
579 aa
AA seq
DB search
MKYRKYVSLFLVILITTIIVGCDREKMVLGNTKDLDLTEEGGSSMDYTPVPGGQVILPLT
NFNTLNPLLTENSNYHFFSKLIFEGLFEFDNNLNITNQLAESYNIKDDGRTVEIQLRNNV
FWHDGQKFSAEDVAFTIDTIKYASSDSTYKQMFSNSLGAYGQGDIKSILNVNITSSDSLN
ITFNKSFSNNLEVLTFPIIPKHIFNSSGNSRYIKALQVNDYKPIGTGPFKFDSYEKMKQI
KLTANDEYWNDRPYIDEILGRVFESEEDILTAFETGQINMATTVDVDWDKYAQNSRIKIL
EFVSSNYEFLGFNFGKEIFSGEKGEALRRAIAYGIDRQAIIQKVYLGHGTQVDVPIHPDS
WLLSDNANKFGYNIDLAKAELNKIGFKDMNNDGIIEDENGNKISLRILTNTYNITRLKTA
EMIKDDLRKIGILVNIYPENNKSDSVTMDDIDKQWEVVNKHLASGDYDIALLGWQLSVIP
DLSFAFHSSRISHNTNFIRYSRENMDNLLQNVFAVGTREKKLEAYDELQELITTDLPYVS
LFFRNKALLIDSKIMGDLSPGLFNPYKGIEKSYIPKEFQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatagaaaatatgtatctttatttcttgtgatattaataactactataatcgta
ggttgcgatagagaaaaaatggttttaggaaatactaaagatttagatttaactgaagaa
gggggaagttctatggactatacccctgttccaggtggacaagtcatattacccttgact
aattttaacactttaaatcccctattgaccgaaaatagtaactatcatttttttagcaaa
cttatatttgaaggtttatttgaatttgataataatctaaatataacaaatcaattggct
gaatcctataatataaaggatgatggaagaactgttgaaattcaattgagaaacaatgtt
ttttggcatgatgggcaaaaatttagtgctgaagacgtggcttttactatagatactatt
aaatatgctagttcagatagtacatataaacagatgttttcaaattctttaggagcatat
ggtcaaggtgatataaaaagtatcttaaatgtaaatattactagttcagatagtttaaac
attacatttaataaatcttttagcaataatctggaagtcttaacatttcctataatacct
aaacatattttcaattcgtcaggtaatagtagatatattaaagcattacaagtaaatgac
tataagccaataggtactggaccatttaaatttgattcctatgaaaagatgaagcaaata
aaattgacagccaacgatgaatattggaatgatagaccttatattgatgaaatactggga
agagtatttgaaagtgaagaagatatattaactgcatttgaaactggacaaatcaacatg
gctaccactgtagatgttgactgggataaatatgcccaaaatagccgaataaaaatacta
gaatttgtttcttctaattatgagttcctaggattcaactttggaaaagaaatattttca
ggagaaaaaggtgaagccttgagaagagccatagcatatggcatagatagacaagctatt
attcagaaagtatatttaggacatggaacacaagtggatgtaccaattcatcctgattct
tggcttttatctgataatgcaaataaatttggctataatatagacttagctaaagcagaa
ctaaacaaaataggattcaaagatatgaataatgatgggattatagaagatgaaaatgga
aataaaatatcccttagaattttaactaatacctataatattacaaggctaaaaactgcg
gaaatgataaaggatgatttgaggaaaattgggatattggttaacatatatcctgaaaat
aataagagtgatagtgttactatggatgatatagataaacagtgggaagtagtaaataag
catttggcatcaggagactatgatatagcgcttcttgggtggcaattatctgtaattcct
gacttatcctttgctttccatagctcaagaatatctcataatacaaattttattagatat
tctagggaaaatatggacaatcttcttcagaacgttttcgcagttggaactagagaaaaa
aagttagaagcatatgatgaattacaggaattaattactacagatctgccatatgtaagt
ttgttcttcagaaataaagctttattaatagatagtaaaataatgggagacttatctcca
ggattatttaatccttataaaggtatagaaaaatcttatataccaaaagaattccagtaa
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