Tissierella sp. MB52-C2: RBU61_13050
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Entry
RBU61_13050 CDS
T09678
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz00300
Lysine biosynthesis
tiz00470
D-Amino acid metabolism
tiz01100
Metabolic pathways
tiz01110
Biosynthesis of secondary metabolites
tiz01120
Microbial metabolism in diverse environments
tiz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RBU61_13050 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBU61_13050 (dapF)
Enzymes [BR:
tiz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RBU61_13050 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
SpoVAD
Motif
Other DBs
NCBI-ProteinID:
WMM23849
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All DBs
Position
complement(2580233..2581069)
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AA seq
278 aa
AA seq
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MNFDKYVAAGNDFILFNGVNNDYEDHNKLALKVCNRHFGIGADGMMIVESSNIADVKMLY
YNSDGSQGEMCGNGIRAFTKYVYDHNIIENKNISIETLAGVKYIDIVADEDNKADIIKVD
MGYPIFEGRRIPINIHKEKIIEEIISVDGKDYIFSALTVGVPHVVIFIEDIDELDINSLG
RKIEEDPLFPKKTNVNFIKVIDKGNINIYTWERGAGRTLGCGTGSCASVVIGNILGKLQN
RVNVNTEGGRLIVEINKDYRIFMIGDAVHVAKGEFLKR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttgaacttcgataaatatgtggctgcaggtaatgattttatattgtttaatggagtaaat
aatgattatgaagatcataataaattggctttaaaagtctgtaatagacactttggcatt
ggtgcagatggtatgatgattgtagaaagcagtaacatagcagatgtaaaaatgctttat
tataattcagatggctcacaaggggaaatgtgtggtaatggaattagagcttttactaaa
tatgtttatgatcataatataatcgaaaataaaaatatatccatagaaacgctggcagga
gtaaaatatattgatatagtagcagatgaagataataaagcggatattataaaggtagat
atgggttatccaatatttgaaggaagaagaattcctataaatatacataaagaaaagatt
atagaggaaattatttcagttgacggaaaggattacatattttctgcattaacagtaggt
gtaccccatgtagttatatttatagaagatatagatgaattagatataaatagtctagga
agaaaaatagaagaagatcctttatttcctaaaaagactaatgttaattttataaaagta
atagataaaggtaatataaatatttatacatgggagagaggagcaggaagaaccttaggg
tgtggaacaggttcttgtgcttccgtagtcataggaaatatattaggtaagcttcagaat
agggttaatgtaaatactgaaggcgggagattaattgtagagataaataaggactataga
atttttatgataggtgatgcagtacatgtagctaaaggcgaatttcttaaaagataa
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