Tissierella sp. MB52-C2: RBU61_14480
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Entry
RBU61_14480 CDS
T09678
Name
(GenBank) DNA glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBU61_14480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_14480
Enzymes [BR:
tiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
RBU61_14480
DNA repair and recombination proteins [BR:
tiz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBU61_14480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
HHH_5
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
WMM24122
UniProt:
A0AA51MTA8
LinkDB
All DBs
Position
complement(2824395..2825264)
Genome browser
AA seq
289 aa
AA seq
DB search
MKYNIIEEQGKIIIKDIKNFDPKHIFECGQAFRWYVEEDNSYTTIAYGKVLNVKNEGNDI
ILSNTNMEDFNNIWYNYFDLGRDYDEIKKQLSKDPILAEAIKFGEGLRILNQEPFEMVIS
FITSANNQIPRIKKSIELMSKNYGEKIDEKYYSFPTPESLSKVSPEELKEICKVGFRGER
IVETAKIIAKGELSLDSIFNLNRDEGKELLMTLPGVGPKVSDCILLFAFNKDEAFPVDVW
VKRVMEHFYLKEETNVKHIGEHGARIFGNLAGFAQQYLFYYARELGIGK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataatataattgaagaacaaggaaaaataataattaaagatataaaaaatttt
gatcctaaacatatatttgaatgtggtcaagcctttagatggtatgtagaagaggataat
tcttatacaacaattgcctatggaaaagtattaaatgtaaaaaatgaaggaaatgatata
atattgtctaatactaatatggaggactttaacaatatttggtataattactttgatcta
ggaagggactatgatgagataaaaaaacagttatcgaaagatcctatattggctgaagcc
ataaaatttggagaaggattgagaattcttaatcaagagccctttgaaatggtaatatcc
ttcataacatcagctaataatcaaataccaagaataaagaaatctatagaattgatgtca
aaaaattacggagaaaagatagatgaaaaatactatagtttcccaacaccagaaagtcta
tctaaagtaagtccagaggaattaaaagagatttgcaaagtaggatttaggggagaaaga
atagtagaaacagcaaaaattatagctaaaggagaattgagtttagacagcatattcaat
ttaaatagagatgaaggaaaggaacttttaatgactttaccaggagtaggaccaaaggta
agtgactgtatactattatttgccttcaataaagatgaagcttttccagtagatgtatgg
gttaaaagggtaatggaacatttttatctaaaggaagaaactaatgtaaaacatatagga
gaacatggtgctagaatatttggtaatctagcgggatttgcacagcaatacttattttat
tatgctagggaactgggaataggtaagtaa
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