Tissierella sp. MB52-C2: RBU61_14580
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Entry
RBU61_14580 CDS
T09678
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBU61_14580 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tiz03019
]
RBU61_14580 (recQ)
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_14580 (recQ)
Enzymes [BR:
tiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBU61_14580 (recQ)
Messenger RNA biogenesis [BR:
tiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBU61_14580 (recQ)
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RBU61_14580 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Pox_I6
Cas3-like_C_2
TniB
Motif
Other DBs
NCBI-ProteinID:
WMM24141
UniProt:
A0AA51MU38
LinkDB
All DBs
Position
2846838..2848991
Genome browser
AA seq
717 aa
AA seq
DB search
MDIYESLKTYFGYTEFRDGQEKLINGILNGKDVLGIMPTGGGKSLCYQLPAVLLDGITIV
VSPLISLMKDQVDSLQEVGISGTFINSTLDDREFNYRIQEIKEGKYKIIYVAPERLNVYS
FLSLLNDIKISMVAIDEAHCISQWGHDFRPSYREIPKFIRNLSHRPVVSCYTATATKEVI
EEIKELINLRNPIESIIGFDRPNLFYEVIKISDKYTYLKNYIKNNHSDESGIIYCATRKT
VETLTQKLANDGFSVVAYHGGMTGDTRQENQDDFIFNRVQIIIATNAFGMGIDKPDVRFI
VHYNMPQNMESYYQEAGRAGRDGENSRCTLLYSPQDIVKQKLLIQNNPISLERETLLYKN
LQYLVDYCHTNDCLRNNILEYFGEKISYDSCGNCGNCLDQSEMMDITIESQKILSCIYRI
QERYGLTTVIQVLRGSKNKRLLEAELDNVSTYGIMKEYGENTLREIIMTLVSMGYIYITT
DKYPVLRLTANAGKVLKGEVKVHHKKHLIEVKSSIEKKLPIGDVLENFNEELFKELKLLR
YSLSQENGLAPFMIFHDSTLKEMASFFPQNKESMLMIKGVGIKKYESYGESFIDLIKNYC
NNNDIESIEAPEKIVREDLVDRYELTYSCYLEGLSLEEISIKRNFTKNTIIEHLAKSQEQ
GKIVDWLRFIDDPSKEEKILSVINQLGLEKLKPIKEALPEEISYEDIKLIIAKNELK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
gtggatatttatgaatctcttaaaacctattttggatatacagagtttagagatggccaa
gaaaaattaataaatggaatattaaatggaaaagatgtcttaggtataatgcctactggt
ggtggaaaatccctttgttatcaattacctgcagttttattagatggtattactatagtt
gtttcacctttaatatctcttatgaaagaccaggtagattccttacaagaagtaggaata
tcaggtacctttattaacagtaccttagatgatagagaatttaattatagaattcaggaa
attaaggaaggaaaatataagataatctatgtggctcctgaaagattgaatgtttattcc
tttctctccttacttaacgatataaaaatatctatggttgccattgatgaagcccattgt
attagtcaatggggtcacgatttcagaccttcttatagagaaattcctaaatttattaga
aatctttcccatagacctgtagtatcctgttatactgcaactgctactaaggaagtaatt
gaagaaatcaaggaattaataaatcttagaaaccctatcgaatctatcattgggtttgat
agacctaatttattttatgaagtaattaaaataagtgataaatatacttatttgaaaaat
tacataaaaaataatcactctgatgaatcaggaatcatctattgtgcaacaagaaaaact
gtagaaaccttgactcaaaaattagccaatgatggattttcagtagtagcctatcatggg
ggaatgactggagatacccgtcaagaaaatcaagatgatttcatatttaatagagtacaa
ataatcatagcaactaatgcctttggtatgggaatagataaacctgatgttaggtttata
gtccattacaatatgcctcaaaatatggaatcctactatcaggaagcaggtcgtgcagga
agggatggagaaaatagtcgctgcacccttttatattctccgcaagatatagtaaagcaa
aagcttttaattcaaaataatcctatatctttagaaagagaaactctactttataaaaac
cttcaatacttggtggattactgccacactaatgattgtcttagaaataatatactggaa
tattttggagaaaaaatctcctatgatagctgtggcaattgtggaaactgtttagatcaa
tctgaaatgatggatattaccatagaatcacaaaaaatattatcttgtatatatagaatt
caagaaagatacggcttgactacagtaattcaagttcttaggggttcaaaaaacaaaaga
cttcttgaggcagaactagataatgtatctacctatggaattatgaaagaatatggagaa
aatacattaagagaaataatcatgactttagtatccatggggtatatctatataactaca
gataaataccctgttttaaggctaacagcaaatgctggtaaagtattaaaaggtgaggtt
aaagtccaccataaaaaacatctaatagaagtgaaatcctccattgaaaagaaacttcct
ataggtgacgtattagaaaactttaatgaagaattatttaaggaattgaagctactacga
tattcgttatctcaagaaaatggactagctccctttatgatattccatgattccacatta
aaggaaatggcttcattttttcctcaaaataaagaatctatgcttatgataaaaggagta
gggattaaaaaatatgaaagctatggagaaagctttatagatttaatcaaaaattattgt
aacaacaatgatatagaatctatagaagccccagaaaaaatagttagagaagatttagta
gatagatatgaactgacttatagctgttatctagaagggctctccctagaagaaatatct
ataaaaagaaacttcactaaaaacaccataatagaacatcttgcgaaatctcaagagcaa
ggaaagatagtggattggctaagattcatagatgatcccagtaaagaagaaaaaatatta
tctgtaataaaccaattgggattagaaaaattaaagcctattaaggaagccttacctgag
gagattagttatgaagatataaagctgataatagctaaaaatgaacttaaataa
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