Tissierella sp. MB52-C2: RBU61_14985
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Entry
RBU61_14985 CDS
T09678
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RBU61_14985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_14985
Enzymes [BR:
tiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
RBU61_14985
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RBU61_14985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
HHH_2
PIF1
SLFN-g3_helicase
AAA_22
AAA_28
nSTAND3
ATPase_2
PhoH
DEAD
RsgA_GTPase
AAA
T2SSE
UvrD-helicase
TrwB_AAD_bind
5_3_exonuc
AAA_16
NPHP3_N
cobW
AAA_29
ABC_tran
UvrD_C
KTI12
NTPase_1
AAA_5
HHH_6
Motif
Other DBs
NCBI-ProteinID:
WMM24220
UniProt:
A0AA51MTK2
LinkDB
All DBs
Position
complement(2936622..2938844)
Genome browser
AA seq
740 aa
AA seq
DB search
MLLEGIIEEVRFRNESNGYTVAKLNTSDGPVTIVGNTPFINLEETVKVEGEWIYHPTYGE
QLAFTSLEIVVPSTLKGIENYLSSGLIPHIGPKTAKRIVEKFGLDSLEVIQYNPEKLREI
SGIGDKKLETIVEAYEEQREVRDIMVFLQQYGITVNYGIKIYKKYGKDTINIIMENPYRL
SEDIYGIGFKTADKIAEKMGINKESLHRVEAGLKYIIMKWAGNGHSYVPKEELISDTKEL
LETEENLIEEGIRNLGLKGSIHIVKDNKDTLVYYTPFHIAENNVSKKLVQLSQVKLDELK
IDVEKEIKRIEEEETILFAEKQILAIKESLENGLVVITGGPGTGKTTTINAIIKICEDLE
LSVILAAPTGRAAKRMTETTGKEAKTIHRLLEYSFMEEESMAFGKDEDNAIEGDLIIIDE
SSMIDILLMNSLLKALNPGTRVVLVGDIDQLPSVGAGNVLKDIIESGAIKVVRLDEIFRQ
SEESMIIVNAHKINKGEDPILNKKEKDFYFLRGDNTKSILDTVVELCNERLPQFYGVDKV
RDIQVLTPMKKGDVGINSLNKHLQSALNPKSDNKEEKEIGGELFRVGDKVMQIKNNYTTE
WKTVKNGIEINKGEGVFNGDFGFIIDIDEEDRTMKVLFDEEKEVEYEFNQLDELKLAYAT
TVHKSQGSEFPVVIMPITWGPPMLLTRNLLYTAITRARKLVVLVGEERYLSMMINNNRIT
KRYSALDKKIRSYMSIFMEE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgttactagagggtatcatcgaagaagttagatttagaaatgagtctaatggttataca
gttgcaaaacttaatacatctgatggtccagttaccatagtaggaaatactccctttatt
aatttagaagagactgtaaaagtggaaggggaatggatttatcatcctacttatggagaa
caattagcttttacaagtttagaaatagtagtaccatctacactaaagggaatagaaaac
tatctttcctctgggcttatacctcatattggaccaaagacagccaagagaatagtagaa
aaatttggactagattccttggaagtcatccaatataatcctgaaaagctaagggaaatc
agcggaattggagataaaaagctagaaacaatagttgaagcctatgaagaacaaagagaa
gtaagagatataatggtgtttttacagcaatatggaattacagtaaactatggaataaag
atatataaaaaatatggtaaagacacaataaatataataatggaaaatccctatagatta
tcagaagacatctatggtataggttttaaaacagcagataaaattgcagaaaaaatgggg
ataaataaggaatcccttcatagagtagaagctggattaaaatatatcataatgaaatgg
gctggaaatggacattcctatgtacctaaagaagaattaatatcagatactaaagaatta
ttagagacagaagaaaatttaattgaagaaggcataagaaacctaggacttaagggaagt
attcatatagttaaagacaataaggatactttggtttattatactccttttcatatagca
gaaaataatgtaagtaaaaaactagtacaattatctcaggtaaaattggatgaattaaag
atagatgtggaaaaagaaataaagagaatagaggaagaagaaactattctatttgctgaa
aaacaaatattagccataaaggaatccttagaaaacggtctagtagtaattactggtggt
ccaggtacagggaagactactactataaatgccataattaaaatatgtgaagacttggaa
ctttcagttatattggcagctcccacaggcagagcagcaaagagaatgacagaaaccaca
ggaaaagaagcaaaaacaatacatagattactagaatactcatttatggaagaagaaagt
atggcatttggaaaagacgaagacaatgccatagaaggggatttaataattatagacgaa
tcttcaatgatagacatattacttatgaattctttacttaaagcattaaatccaggaact
agagtagttctagtgggagatatagatcaattaccatctgtaggtgcaggaaatgtatta
aaagatataatagagtcaggagcaattaaggtagtaaggttagatgaaatctttagacag
tcagaagaaagcatgataatagtcaatgctcataaaataaataagggagaagacccaatc
ttaaataaaaaagaaaaggatttttattttttaaggggagacaatacgaaatccatttta
gatacagtagtagaactttgtaatgaaagacttccacagttttatggagtagataaagta
agggatattcaagtcctaactccaatgaaaaaaggagatgtaggtattaattctctaaat
aaacatttgcaatcagctttaaatccaaaaagcgataataaggaagaaaaagaaataggt
ggagaattatttagagttggcgataaagtaatgcagataaaaaataattatactactgaa
tggaagacagtgaaaaatggaatagaaataaataagggtgagggagtatttaatggagat
tttggatttatcatagatatagatgaagaagatagaactatgaaggttctctttgatgag
gaaaaagaagtggaatatgagttcaatcaattagatgaattgaaattagcctatgctacc
acggtacataaatcccaaggttcagaatttccagtagttataatgccgattacatgggga
ccacccatgcttttgactagaaacctattatatactgccattacaagggcaagaaaacta
gtagtattagtaggagaagaacggtatttatctatgatgataaataataatagaataaca
aagagatattcagccttagataagaaaattagaagctatatgtctattttcatggaggaa
taa
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