Tissierella sp. MB52-C2: RBU61_17895
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Entry
RBU61_17895 CDS
T09678
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03420
Nucleotide excision repair
tiz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBU61_17895 (helD)
03430 Mismatch repair
RBU61_17895 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tiz03400
]
RBU61_17895 (helD)
Enzymes [BR:
tiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBU61_17895 (helD)
DNA repair and recombination proteins [BR:
tiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBU61_17895 (helD)
MMR (mismatch excision repair)
Other MMR factors
RBU61_17895 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PhoH
UvrD_C_2
DEAD
SLFN-g3_helicase
Viral_helicase1
nSTAND3
AAA_30
NACHT
ResIII
AAA_11
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
WMM24774
UniProt:
A0AA51MY47
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All DBs
Position
3561038..3563275
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AA seq
745 aa
AA seq
DB search
MNRDNFEWKAEDEWLQEVLEEAGKQYDNNNNLKEKIREDAIRTQKELWEEVGSVSIANGM
DQITDFMQFINFMRTQKISHESTRKIQEKYEKVLSSPYFGRIDFIEDVENEAEKYYIGLS
NLINDNFDFLVYDWRAPISSMFYDCEIGEASYKCPEGVMEGELILKRQYKINNGKMEYMF
DSNLKIDDEMLQDILSKSTDDRMKAIVTTIQREQNRVIRDEEYKVLIVQGPAGSGKTSIA
LHRIAYLLYRYRDKITPRNIVIFSPNEIFNDYISNVLPELGEDNMYQTTFKEYMHMALGG
EFIKESYCDMMEYILNSKNELNYKNRITNIMYKSTVEFVNILKYYVTYVEKIDRKFTDII
FRDMLVVSSKDLEELFFKDYIRLPLKRRLKKIKERILFLLDPYKKDRIKKVVGELEDTGS
YINKMEILKDSISIVNNEMKEIYNEIDRITEFNLAEIYKGFFENLEFFCRNLNIPYCKEK
IEKIRNYTIKNLETQKLNYEDQIPLLYLKAALGDIPKTSDIKYVIIDEAQDYTPLQYEIF
CQLFESANMTILGDLNQSINPFMNIGGYNNISYIFSESNTCIINLTKSYRSTKEITEFSR
KLLNSKFVDESIQRNGNRPLLIGFSKEEEIKEKILNDIKIYKERGYKSIGIITRTAKEAN
DVYDFLKDKIHIKAIMKDDDDYVNDTLVIPAYLAKGLEFDVVLIYNVGNGNYCCEDERLL
LYTACTRALHILCIYYSGKCTPLLN
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaatagagataattttgaatggaaggctgaagatgaatggctgcaagaagtacttgaa
gaagcagggaaacagtatgataacaacaacaatttaaaagaaaagattagagaagatgct
attagaacacagaaggaactatgggaggaagtaggttcagtttccatagcaaacggaatg
gatcaaatcacagactttatgcaatttattaattttatgaggacacaaaagataagccac
gaatcaactagaaaaattcaagaaaaatacgagaaggtactttcatcaccttatttcgga
agaatcgattttattgaagatgtagagaatgaggcggagaaatattatataggtctttca
aaccttattaatgataattttgattttcttgtatatgactggagggcaccaatttctagt
atgttttatgattgtgaaattggagaggctagttataaatgtcctgaaggagtaatggaa
ggggaacttatactaaaaagacaatacaaaattaataatggaaaaatggagtatatgttt
gatagcaatcttaagatagatgatgaaatgcttcaagatattttgagtaaaagtactgac
gataggatgaaggccatagtaacaacaattcaaagagagcagaacagagtgattcgtgat
gaagagtacaaagtcctaattgttcaggggcctgcaggaagtggaaaaacttctattgct
cttcatagaattgcataccttctatatagatatcgtgataagataacgcctcggaatata
gtaatattttcacccaatgaaatttttaatgattatatttctaatgtattaccagagctg
ggagaagacaatatgtatcaaactacctttaaggaatatatgcatatggcattaggtggt
gagtttataaaggaaagttattgtgatatgatggaatatattttaaattcaaagaatgaa
ttaaactataaaaacagaattactaatataatgtataaatctactgtggaatttgtaaat
atattaaaatattatgtgacctatgttgaaaaaatagatagaaaatttacagatattatt
tttagagatatgttagtagtatcatctaaagatttagaagaattatttttcaaagattat
ataaggcttcctctaaaaaggagattaaaaaaaattaaggaaagaatattatttctttta
gatccatataaaaaagacaggataaagaaagttgtaggtgaattggaggatacgggatca
tatataaataaaatggaaatattaaaagatagtatctctattgtaaataatgaaatgaag
gaaatatataatgaaatagacagaataacagagtttaatttagcagagatttacaaggga
ttttttgaaaatctagagttcttctgtaggaatttaaatataccatattgtaaagagaaa
attgaaaaaattagaaattatactataaaaaatttagagactcagaaacttaattatgaa
gatcagattccccttctatatctaaaagctgctttgggagatatcccaaaaacttcggat
attaaatatgttattattgatgaagcccaggactatacgcctctacagtatgaaatattt
tgtcagctttttgaatctgcaaatatgactatactaggggatttaaatcaatctattaat
ccgtttatgaatataggaggttataataatatatcctatatattttctgagagtaacacc
tgtataataaacttaactaaaagttacaggtctacaaaggaaatcactgaattctctagg
aagctacttaatagtaaatttgttgatgaaagtatacaaagaaatggaaatagaccatta
ttaattggattttcgaaagaggaggaaataaaggagaaaatccttaatgatataaaaata
tataaggagagaggatataaatccattggaataataacaaggactgcaaaggaagcaaat
gatgtatatgattttctaaaggataagattcatattaaggccataatgaaggatgatgat
gactatgttaatgatacattggtgataccagcatatcttgctaaaggattagaatttgac
gttgtgcttatttataatgtaggaaatgggaattactgttgtgaagatgaaaggctgctg
ctttatactgcctgtactagagcacttcatattttatgtatatattatagcggaaagtgt
acaccattgttgaattga
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