Tissierella sp. MB52-C2: RBU61_18075
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Entry
RBU61_18075 CDS
T09678
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tiz
Tissierella sp. MB52-C2
Pathway
tiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBU61_18075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tiz03019
]
RBU61_18075
03009 Ribosome biogenesis [BR:
tiz03009
]
RBU61_18075
Enzymes [BR:
tiz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBU61_18075
Messenger RNA biogenesis [BR:
tiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBU61_18075
Ribosome biogenesis [BR:
tiz03009
]
Prokaryotic type
rRNA helicases
RBU61_18075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WMM24810
LinkDB
All DBs
Position
3596207..3597460
Genome browser
AA seq
417 aa
AA seq
DB search
MSGSFRDLGISEELEAILNKNGITEPTLIQEKTIRELLNGRDVVAQAQTGTGKTLAFLLP
IIQKIDTNKSYIQGLIITPTRELAIQVTNEAKKLMGEKEINILAAYGGQDVEQQVRKLKK
GIHLVIATPGRLLDHIRRETIDFGRVNFLVLDEADEMLNMGFLKDVESIIVNTPKARQTM
LFSATIPNEIRSLGKRFMRNPLQVEIQGKNITLDEIEQVIIETTERKKLDILCQLIDEYN
PYLAIVFCRTKQGVIALNGELLSRGYNSDELHGDLSQAKRERVIKSFRTAKIQILVATDI
VARGLDVEGVTHVINYDIPRNVDSYIHRIGRTGRIGNLGTAITFVTERDRDDLALIQRKV
KADLKTRKVEKNGRKDVKKPDNKPEKKKTISKEYKFERTKGSGPRYAFKNKKNSKKK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagtttcagagatcttggaataagcgaagaactggaagctatattaaataaa
aatggaataacagaacctacacttattcaagagaaaaccataagggaactattaaatgga
cgtgatgtagtagctcaggctcaaacaggaacaggtaaaactttagcatttttattgcca
attatacagaaaatagatacaaataagtcatatatacaaggattaatcataactccaact
agagagctggctattcaagttacgaatgaggctaaaaaacttatgggtgagaaggaaata
aatattttagcagcctacggtggtcaggatgtggagcagcaagtaagaaagctaaaaaag
ggtattcatttagtaatagctactccaggtagactattggatcatataagaagagaaacc
atagattttggtagagttaattttttagtattagatgaagcagatgaaatgcttaatatg
ggatttttaaaagatgtagaaagtatcatagtgaatacgccgaaggctcgtcaaaccatg
ttattttctgctacaatacctaatgaaataagatctttaggcaaaagatttatgagaaat
cctttgcaagttgaaatacaaggaaaaaatattacattagatgagatagaacaagtaatt
atagaaactactgaaagaaagaagttagatatactttgtcaattaattgatgaatataat
ccctatttggctattgtattctgtcgtacaaaacagggagtaattgccttaaatggtgaa
ttgctttctagaggatataattcagatgagcttcatggagatcttagccaagctaaaagg
gaaagagtaattaaatcctttaggactgcaaagattcaaatccttgtggcaacagacatt
gtggctagaggtttagatgtagagggagtgacccatgttattaactatgatatacctaga
aatgtagatagttatattcatagaattggtagaactggaagaattggaaacttaggtact
gcaattacctttgtaacagagagagatagagacgatttggcattgattcaaaggaaggtt
aaggcagacttaaagactagaaaagtagagaagaatggaagaaaagatgtaaagaaacca
gataataaacctgaaaagaagaaaactatatctaaagaatataaatttgaaaggactaaa
ggtagtggtcctagatatgcctttaagaataaaaagaatagtaaaaagaagtaa
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