Tissierella sp. MB52-C2: RBU61_18780
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Entry
RBU61_18780 CDS
T09678
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tiz
Tissierella sp. MB52-C2
Brite
KEGG Orthology (KO) [BR:
tiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tiz03016
]
RBU61_18780
Enzymes [BR:
tiz01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
RBU61_18780
Transfer RNA biogenesis [BR:
tiz03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
RBU61_18780
Prokaryotic type
tRNA splicing ligases
RBU61_18780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
SpoIISA_toxin
NNF2_middle
Motif
Other DBs
NCBI-ProteinID:
WMM24948
LinkDB
All DBs
Position
3750903..3752117
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AA seq
404 aa
AA seq
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MELQGEHNIAKVFTDNLEDGAKEQILELLNQDFVKDSKVRIMPDVHQGMGCVIGFTADMG
DKVIPNIVGVDIGCGMLTVELGHIDIDLPKLDDIIHKRIPSGKSTHNERKSKFDKLNDLY
CFRDLKDTKRIERSIGTLGGGNHFIEVGVDSKNNKYLVIHSGSRNLGKQVAEIYQRLAID
LCSGKEDYFIKRDEIITGYKAEGKRKEIKKVLEELKKEYDNLQPSYPKALCYLTGEYREK
YLHDMKICQEYASLNREVMVDIILQSLFKKGLHEFTYFETIHNYINFKDNIIRKGAISAY
EGEKVLIPINMRDGSIVAIGKGNPDWNYSAPHGAGRLMSRNVAKESVNLDDFRKSMEGIY
STSVNEYTLDESPFAYKPIEEILNNITETAKIVDIIRPIYNFKA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaggagaacataatatagcaaaggtttttaccgataatcttgaagatggt
gcaaaggaacagatacttgaattactaaatcaagattttgttaaggattctaaagttcga
ataatgcctgatgttcatcaaggtatggggtgtgtaattggctttacagctgatatggga
gataaggtaatacccaatattgttggagttgatataggatgtggcatgcttactgtagag
cttggacatatagatatagatttacctaaattagatgatataatacacaaaagaattccg
tcaggcaaatctactcataatgaaaggaaatccaaatttgacaaattaaatgatttatat
tgttttagagatttgaaggataccaaaagaattgaaagaagtataggaacattaggtgga
ggcaatcatttcattgaagtcggagtagatagtaaaaacaacaaatacttagtgatccat
tcaggcagtagaaatctagggaaacaagttgcagagatatatcaaaggctagctatagat
ttatgtagtggaaaagaagattactttattaaaagagatgaaataattactggatataaa
gcagaaggtaaaagaaaagaaataaagaaggtgcttgaagaactaaaaaaggaatatgat
aatctccaacctagctatccaaaagcattatgttatttaactggagaatatagagaaaag
tatttacatgatatgaaaatttgtcaagaatatgcaagcttaaatcgtgaagtgatggta
gatatcatcctacaatctttatttaaaaaaggattgcatgagtttacctactttgaaacc
attcataactatattaatttcaaagataatattattaggaaaggggctatatcagcttat
gagggagagaaagttttaatccctataaacatgcgagatggttccatagttgccatagga
aagggaaatccagattggaactattcagctccccatggtgcaggaagacttatgagcaga
aatgttgcaaaggaatctgttaatttagatgattttagaaaaagtatggaaggtatatat
tctacatcagtaaatgaatacacattagatgaatcgccttttgcctataagcctatagaa
gaaatactcaataatattactgaaactgccaagattgtagatataataaggccaatatat
aattttaaagcatag
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