Tenacibaculum jejuense: TJEJU_0095
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Entry
TJEJU_0095 CDS
T05041
Symbol
rhlE
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tje
Tenacibaculum jejuense
Pathway
tje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TJEJU_0095 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tje03019
]
TJEJU_0095 (rhlE)
Enzymes [BR:
tje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TJEJU_0095 (rhlE)
Messenger RNA biogenesis [BR:
tje03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TJEJU_0095 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
ERCC3_RAD25_C
StiP
Motif
Other DBs
NCBI-ProteinID:
SNR13904
UniProt:
A0A238U5Y9
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All DBs
Position
TJEJU:complement(106269..107600)
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AA seq
443 aa
AA seq
DB search
MTFESLGLKKELLKAIEEKGYVNPSPIQEKAIPVILKGNDVLASAQTGTGKTAGFTLPIL
QIITDTKNPKFRPIRALILTPTRELAAQIYDNVRDYSKHLNIKSTVIFGGVKPKKQIATI
RNGIDVLVATPGRLLDLHDQKALSLKRIDILILDEADRMLDMGFVRDIKKIIALLPEKRQ
NLLFSATFSKEIKALAKGILTDPVLVEAAPENTTAEMVKQKIYRVPKSRKAAMVTQLISD
GNWNQVLIFTRTKHGANRLAEKLQKRDISSAAIHGNKSQSARVKALKGFKENTVRVLVAT
DIAARGLDIPLLPHVINYELPNIPEDYVHRIGRTGRAGASGEAISLVADEELEYVKNIEK
LLKQKLKIVELEGFDLTPTEQPQQKKTSKENNNNSKPSKKNQTRRNFRSKKKSENSKESN
SNTPRKNRSNFKRKPKNNNRKKS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaatcactagggttaaagaaagagcttttaaaagcaattgaagaaaaagga
tatgtaaacccatccccaatacaagaaaaagcaataccagtaattttaaaaggtaatgat
gtactagcatctgcacaaacaggaacaggaaaaaccgctggttttacattaccaatattg
caaataataacagatactaaaaatccaaaatttagaccaatacgtgcactaatactaact
cctaccagagaattagctgctcagatttacgataatgttcgagattatagcaaacatctt
aatattaagtcgactgtaatttttggaggtgtaaaacctaaaaaacaaattgcaacgata
agaaacggtatagatgtactagttgccacaccaggtaggttattagatttacatgaccaa
aaagcattatcactaaaaagaattgacattctgattctagacgaagcagatagaatgtta
gatatgggctttgttagagatattaaaaaaattatagctctacttcctgaaaaacgccaa
aacttacttttttctgctactttttctaaagaaataaaagccttagctaaagggatttta
acagatcctgttctagttgaagctgctcctgagaatacaactgcggaaatggttaagcaa
aagatatatcgtgttccaaaaagtagaaaagcagccatggtgacgcaattaatttctgac
ggtaattggaatcaagtacttatttttacacgaactaaacacggagcaaatagactagct
gaaaaactacaaaaaagagatatttcttctgctgcaatccatggaaataaaagtcaaagt
gcaagagtaaaagctttaaaaggatttaaagaaaatactgttcgtgttttagtagctact
gatattgctgctcgaggattagatattcctttattacctcatgtgattaactatgaatta
cctaatattcctgaagattatgtgcatagaattggtagaactggtagagctggtgcaagc
ggagaagctatatctttagttgctgacgaagaattagagtatgttaaaaacattgagaaa
ttattaaagcaaaagctaaaaattgttgaattagaaggttttgatcttacgccaaccgaa
caacctcaacagaagaaaacttccaaagaaaacaacaacaactcaaagccaagtaaaaag
aatcaaacaagacgaaattttcgatctaaaaagaaatctgaaaatagtaaggaaagtaat
tccaatactcctcgaaaaaacagaagtaactttaaaagaaaaccgaaaaataataacaga
aaaaaatcttaa
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