Tenacibaculum jejuense: TJEJU_0823
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Entry
TJEJU_0823 CDS
T05041
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tje
Tenacibaculum jejuense
Pathway
tje03030
DNA replication
tje03430
Mismatch repair
tje03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TJEJU_0823 (dnaE)
03430 Mismatch repair
TJEJU_0823 (dnaE)
03440 Homologous recombination
TJEJU_0823 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tje03032
]
TJEJU_0823 (dnaE)
03400 DNA repair and recombination proteins [BR:
tje03400
]
TJEJU_0823 (dnaE)
Enzymes [BR:
tje01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TJEJU_0823 (dnaE)
DNA replication proteins [BR:
tje03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TJEJU_0823 (dnaE)
DNA repair and recombination proteins [BR:
tje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TJEJU_0823 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
HHH_3
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
SNR14594
UniProt:
A0A238U7X1
LinkDB
All DBs
Position
TJEJU:880388..884722
Genome browser
AA seq
1444 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRAIQIAWQLHDEMGNLIEHNDFLIKADGFNIPF
DAERIHGISTELANEQGIGLAEGLDLFNEALKKAKFVVGQNVGFDVNIMGCEFHRLGVEN
NLTELPVLDTCTELTASMCQIPGGRGGKFKLPTLTELHQHLFGVGFNEAHNATADVEATT
RCFLELLRLKHYPLEVLDVPEDYYAKYSETNPMPIQLIGLKHLNLKAESDKIRKREAAAS
SEGNAQSTSEGLAQLEGVQFAHLHNHSQFSVLQSTIQINGLVAAAAKDNMSAVALTDTGN
MMAAFHFTSAVANHNKSAETPLKPIVGCEFFICEDHKDKTRKDNGYQVVLLAKNKRGYHN
LAKMSSTAFVDGFYYVPRIDKEIVKQYKEDVIVLTGNLYGEVPNKILNVGEKQAEEALLW
WKEEFGDDLYIELMRHGQEDEDAVNRTLLEFAKKHEIKIVATNNTYYLGKEEANAHDILL
CVKDGEKQATPKGRGRGYRYGLPNDEYYFKSTEEMKKLFADIPEAISNIQEIVDKVEAFT
LARDVLLPAFEIGEEFQDAQDEVDGGKRGENNYLRHLTYEGAKIRYGELTEKITERLDFE
LDVIAKTGYPGYFLIVEDFIRAAREMGVSVGPGRGSAAGSVVAYCLWITNIDPIKYDLLF
ERFLNPERVSMPDIDIDFDDEGRGRVMDYVIEKYGANQVAQIITYGTMAAKSSLRDTARV
LDLPLFEADRIAKLVPGIKLKNIFGEDEKSKGKVAGLRAEEKENVNELKAIAQGAGLEAN
TINQAVVLEGSVRNTGIHACGVIITPDDITKFVPVSLAKDSDMYVTQFDNSVVESAGLLK
MDFLGLKTLTLIKDTVKIVKARHGVELDPENFPIDDEETYALFQRGETVGIFQYESPGMQ
KYMRELKPTVFADLIAMNALYRPGPLEYIPSFIRRKHGDEEIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLADFTKGEADVLRKAMGKKQAAVLAKMKPKFVDQAKANGHDEKALEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSNNMNDIKTVSFFMEEC
KRMGLEVLGPDVNESYSKFSVNKEGAVRFGMAAIKGVGASAVKAIIDERKENGNYNSIFD
VAKRVDLRVANKKAFEGLVLAGGFDSFTNAHRAQYYVRDEKEQTFLEKAIRFGNKYQENQ
NSSQVSLFGEASEVDLPEPIIPECDTWGTMELLAKEKEVVGMYISAHPLDDFKNELKFCN
GNVSYFKDLAKYEGMAITFGGILTDVQHRVSKAGKGWASFIIEDYNDSFEFRIFGEEYLR
FKHFLVPNSFLYIKTMVKPGWVNKEGVKGDPRVGFTEFLLLHDIMEKMCKKLTIKLALKD
VKEDFIKDFQHLCVLNSGSHSLRFVIYDVEEKLEIDIPSRTTKINITSEFLAKLDEEHIN
YKLN
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatctttgatacagaaacaactggtttacctaagagttggaatgcgccaatt
actgatactgataactggcctagagcaatacaaattgcttggcagttgcatgatgaaatg
gggaatttaattgagcacaacgatttcttaattaaagccgatggatttaatattccgttt
gatgcagaacgtatacatggtatttctacagagttagccaatgaacaaggaattggtctt
gcagaaggattagatttatttaatgaagccttaaaaaaggcaaagtttgttgttggtcag
aatgtaggttttgatgtgaatattatgggatgtgaattccatcgattaggtgttgaaaat
aatttaactgaattacctgttttagatacgtgtaccgagttaacagcttccatgtgtcaa
attcccggaggtagaggaggtaaatttaaactaccaaccttaacagagttacatcaacat
ttatttggtgtggggtttaacgaagcgcacaatgcaacggccgatgttgaagcaacaaca
cgttgttttttagagttactacgtttaaaacattatccgttagaagtattagatgttcca
gaagattactacgcaaagtattctgaaacgaatccaatgccgattcagcttattggttta
aaacatttaaacttaaaagcagaaagtgataaaattagaaagcgtgaagctgctgcttca
agtgaaggaaatgctcagtcgacttcagaaggtttagcacaattagaaggagttcagttt
gcgcatttacataaccactctcaattctcggtattacaatctaccattcaaattaatgga
ttagttgctgcggctgcaaaagataacatgagtgcagttgctttaacagatacaggaaat
atgatggcggcattccattttacgtctgctgtagccaatcataataaatctgctgaaaca
ccattaaaacctattgtgggttgtgagttctttatttgtgaagatcataaagacaaaaca
agaaaagacaatggttatcaggttgttttattagcgaaaaataaacgagggtatcataac
ttagctaaaatgtcatcaacggcttttgttgatggattttattatgtgcctagaattgat
aaagagattgtaaaacaatacaaagaagatgttattgttttaacaggaaacttatatggt
gaagttccaaataagattttaaatgttggtgaaaaacaggctgaggaagctttgttatgg
tggaaagaagagtttggagatgatctgtatatagagttaatgcgacacggacaagaagat
gaagatgccgtgaaccgtacgttgttggaatttgccaaaaaacatgagattaaaattgtt
gcgaccaataacacctattatttaggaaaagaagaagcaaatgcacacgatattttattg
tgtgtaaaagacggagaaaaacaagctactccaaaaggtagaggtagaggttatcgttat
ggtttacctaatgatgagtattatttcaagtctactgaagaaatgaaaaagctttttgct
gatattcctgaagcaattagtaacattcaagaaattgtagataaagtagaagcattcacc
ttagcacgtgatgtattattaccagccttcgaaattggcgaagaatttcaagatgcacaa
gatgaagtggatggtggtaaacgaggagagaataattatctacgtcatttaacttacgaa
ggagctaaaattcgttatggtgaacttactgaaaagattacagagcgattagattttgag
ttagatgtaattgcaaaaacaggatatcctggttatttcttaattgtagaagattttatt
cgcgcagcacgtgaaatgggagtttccgtaggtccgggtcgtggatctgctgctggttct
gtagttgcatattgtttatggattaccaatatagatcctattaagtatgatttacttttt
gagcgtttcttaaatcctgaacgtgtatccatgcccgatatcgatattgactttgatgat
gaaggtcgtggtcgtgtaatggattatgtaatcgaaaagtatggagccaatcaggtagca
caaattattacttatggtactatggcggcgaaatcttcgttacgtgatacagccagagta
ttagatttacctttatttgaagcagatagaatagcaaaacttgttcctggaatcaagcta
aaaaatatttttggtgaagatgaaaagagtaaagggaaagtagctggtttaagagcagaa
gaaaaagagaatgtaaacgagctaaaagctatagcacaaggagcaggattagaagcgaat
acaattaatcaagccgttgtattagaaggttcggttcgtaatacaggtattcatgcctgt
ggtgtaattattactccagatgatatcaccaagttcgttccagtatctttagctaaagat
tctgacatgtacgtaacacagttcgataactcggttgtggaaagtgcaggattactaaaa
atggatttcttggggttaaaaacattaaccctaattaaagatacagttaagattgtaaaa
gcacgtcatggagtagaactcgatcccgagaattttcctattgatgacgaagaaacatat
gcattattccaaagaggggaaaccgttggtattttccagtacgaatctcctggaatgcaa
aaatacatgcgtgaattaaagcctaccgtatttgccgatcttattgccatgaacgcatta
tatcgtccaggtccgttagaatatattccttcttttatccgaagaaaacatggagatgaa
gaaatcgaatatgaccttcctgcaatggaagaatatttagcagagacttacggaattacg
gtatatcaggagcaagtaatgctactttcgcaaaaactagcagattttaccaaaggtgag
gccgatgtacttcgtaaggctatgggtaaaaagcaggcggcagttctagcaaaaatgaaa
ccgaagtttgtagatcaggcaaaagcaaatggacatgatgaaaaagctttagagaagatt
tggaaagactgggaagcatttgcatcgtatgcctttaacaaatcgcactctacatgttat
gcttggattgcctatcaaactgcttatttaaaagcacattatcctgcagaatacatggca
gctgtactttctaataacatgaatgatatcaaaacagtatcgttctttatggaagagtgt
aagcgtatgggattagaagtattgggtccagatgtaaatgaatcgtattctaaattctct
gtaaacaaagaaggagcagttcgttttggaatggcagctattaaaggagtaggagcttca
gctgtaaaagcaattattgatgaacgaaaagaaaacggaaattataattcaatcttcgat
gttgcaaaacgtgtagatttacgtgtagcgaataaaaaagctttcgaaggattagtatta
gctggaggattcgattcttttacaaatgcacacagagcgcaatattatgttagagatgaa
aaggaacaaacgtttttagaaaaagcgattcgtttcggaaataaatatcaggaaaatcag
aattcttctcaggtatctttatttggagaagcaagtgaagtagatttaccagagccaatt
attcctgagtgcgatacttggggaacaatggaattacttgctaaggagaaagaagtcgta
ggaatgtatatttcggcgcatccattagatgattttaaaaacgaattaaagttctgtaat
ggtaatgtgagttactttaaagacttagcgaaatatgaaggtatggcgataacctttgga
ggtattcttacagatgttcagcaccgtgtttctaaagcaggaaaaggttgggcttcgttt
attattgaagattataacgatagttttgaatttaggatctttggagaagaatatttacgt
ttcaaacactttttagtaccaaattctttcttgtatataaaaactatggtaaagccaggt
tgggtgaataaagaaggcgtaaaaggagatcctagagtcggatttacagagttcttactc
ttacacgatattatggaaaagatgtgtaagaagttaaccataaaattggcattgaaagat
gttaaagaagattttataaaagatttccaacatctatgtgtattaaattctggttcacat
tcgctacgttttgtaatttatgatgtagaagaaaaattagaaatagacatacctagtaga
actacgaagattaatatcactagtgagtttttagcaaagcttgatgaagagcatatcaat
tataagttgaattag
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