Tenacibaculum jejuense: TJEJU_1870
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Entry
TJEJU_1870 CDS
T05041
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
tje
Tenacibaculum jejuense
Brite
KEGG Orthology (KO) [BR:
tje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tje03400
]
TJEJU_1870 (sbcD)
DNA repair and recombination proteins [BR:
tje03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TJEJU_1870 (sbcD)
Archaeal homologous recombinant proteins
TJEJU_1870 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
SNR15576
UniProt:
A0A238U9A0
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All DBs
Position
TJEJU:complement(2050885..2052087)
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AA seq
400 aa
AA seq
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MKILHTADWHLGHRLHEQSQVEEQSLFLHWIENYIIDHKIDVLLISGDVFDTGSPSNQSL
EMYYNFLVKLKATSCKSIIITGGNHDSPGTLNAPKHILDALSIKVVGKATEDVADEVFKV
AINNETVIVGAVPYLRDGDIRRAVAGETFEELTDKYKTALINHYKAVAEQCELVNTKNAP
VIAMGHLFATGGSISDSEQNIYVGTLGHIGAEDFPDYFDYVALGHLHRPQIVGGNDKIRY
SGSPNVLSFSEIGYDKKILVLTIENNKITNVSDETIPCFRSFYKLKGTINECIEKFPTIT
SNTYKLTPWVEIVLKEDNNINIDVLKKAAENYSFEILKTSLKNRRQTKGIEELLENTKSI
KELVPEEVFKMKCQEMSYDLEKNPAVLDAFNEILHTVKNQ
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttcacaccgccgattggcatttaggacatagattacacgaacaatctcaa
gtagaagaacaaagcttgtttttacattggattgaaaattatatcattgatcataaaatt
gatgtcttactgatatcaggagatgtttttgatacaggatcgccttccaatcaaagttta
gaaatgtattataattttttggtaaaattaaaagccacttcctgtaaatcgattatcatt
acaggaggtaatcatgattcaccaggaacattaaatgcaccgaaacatatactagatgcg
ctttctataaaagttgtgggaaaagctactgaagatgttgctgatgaagtttttaaagta
gctatcaataacgaaactgtgatagtaggtgctgttccttatttacgtgacggagatata
cgacgtgcagttgcaggtgaaacatttgaagaactaaccgataaatacaaaacagcctta
attaatcattataaagctgttgccgaacaatgtgaattagtaaatactaaaaatgctcca
gtaattgctatgggacacttatttgctacaggaggttctatttctgatagtgaacaaaat
atctatgtaggtactttaggtcatattggtgccgaagattttcctgattattttgattat
gtagcgttagggcatttacacagacctcaaattgttggcggaaatgataaaattcgatat
tcaggatcacccaatgtattaagttttagtgaaattggttacgataaaaaaatacttgta
ctaacaatagagaacaataaaataactaatgtatcggatgaaacaattccttgttttaga
tctttttacaaattaaaaggtaccataaatgaatgtattgagaaatttccaacaattact
tccaatacatacaaactaactccttgggttgaaattgtcttaaaggaagataataatatc
aatattgatgttttaaaaaaagcagctgaaaattactcctttgaaattttaaaaacttct
ttaaaaaacagacgtcaaacaaaaggtattgaagaattgttagaaaatacaaaatccata
aaagaattggttcctgaagaagtgtttaaaatgaagtgtcaagaaatgagttacgattta
gaaaaaaatccggctgttttagatgcttttaatgaaattttacacactgttaaaaatcaa
taa
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