Tenacibaculum jejuense: TJEJU_2769
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Entry
TJEJU_2769 CDS
T05041
Symbol
uvrA1
Name
(GenBank) Excinuclease ABC, A subunit UvrA1
KO
K03701
excinuclease ABC subunit A
Organism
tje
Tenacibaculum jejuense
Pathway
tje03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tje00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TJEJU_2769 (uvrA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tje03400
]
TJEJU_2769 (uvrA1)
DNA repair and recombination proteins [BR:
tje03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TJEJU_2769 (uvrA1)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
TJEJU_2769 (uvrA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
UvrA_DNA-bind
AAA_21
AAA_29
nSTAND3
AAA_16
AAA_18
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
AAA_22
AAA_25
AAA_33
ATPase
NACHT
ATPase_2
Viral_helicase1
AAA_24
AAA_14
AAA_23
cobW
NTPase_1
AAA_5
T2SSE
type_II_gspD_N0
DUF87
Motif
Other DBs
NCBI-ProteinID:
SNR16447
UniProt:
A0A238UB66
LinkDB
All DBs
Position
TJEJU:3064096..3066906
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AA seq
936 aa
AA seq
DB search
MFIFEFMKVDITKVNPKENIIIKGASLHNLKDIDVVIPRNKLVVITGLSGSGKSSLAFDT
LYAEGQRRYVESLSSYARQFLGKLNKPKVDYIKGIAPAIAIEQKVNSTNPRSTVGTSTEI
YDYIKLLYARIGRTFSPISGNEVKKHTVTDVVNHVKSLKEQTKLLLIAPVVLPEKRTIES
LLQVLKQQGYARIKYNNKVYRIDKFPIEDFKGNSIDLVVDRVVVQHDEDFYNRLADAIQT
AFFEGKGFCYIENLETEAKTEFSNKFELDGITFLEPNTHLFSFNNPYGACPTCEGYGNVI
GIDEDLVIPNTGLSIYEDAIFPFRTDAYKWYKENLILHADSYNIPIHKPWFELTEEQQNL
VWEGTDKFMGIHHLFNELEEKSYKIQNRVMLSRYRGKTKCHECDGKRLRKEANYVRVSGK
TISDLVNLPLDELSVFFKSITLNEYEEKIAKRLLTEINNRLQFLTDVGLSYLTLNRTSNT
LSGGESQRINLATSLGSSLVGSMYILDEPSIGLHPKDTERLIKVLKNLRDLGNTVIVVEH
DEDIMKEADYIIDIGPEAGTHGGKVVAEGTYDELIKSKTLTAEYLSETLEIEVPKQRRKT
KNFIKILGARENNLKNIDVTFPLNNLTVITGVSGSGKSTLVKKLLYPIMQKKLIGYGDKI
GQYTDVEGSYENLKHVEFIDQNPIGRSSRSNPVTYIKAYDDIRKLLSTQKLSKIRNYQPK
HFSFNVEGGRCEVCKGEGVVTIEMQFMADVHLQCDHCKGKRFKKEILEVNFEGKNIDDIL
NLTIDDAIDFFTENGAIKIAKKLKPLQDVGLGYVQLGQSSSTLSGGEAQRIKLASFLMKG
NTKDKALFIFDEPTTGLHFHDIKKLLASFNALIEKGHSIIVIEHNIDLIKCADHIIDLGI
EGGKKGGNLIFEGTPEGLTKENQSLTGIFIKEKLKN
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttttgagttcatgaaagtagacattactaaagtaaatcctaaagagaatatc
atcataaaaggagcatcattgcataatttgaaagatattgatgttgttattcctagaaat
aaacttgtggttataaccggactttctgggtcgggtaaatcttcattagcttttgatact
ttgtatgcagaaggccagcgtagatatgtagaaagtttatcttcttatgctcgacagttc
ttaggaaaactaaacaaaccgaaagtagattatattaaagggattgctccagctattgcc
attgaacaaaaggtaaattctacgaatccaagatctactgttggaacttctactgaaatt
tacgattacataaaattattatacgcaagaataggtagaaccttctctcctatttctgga
aatgaagtcaaaaaacatacagtaaccgatgttgtaaatcacgtaaaatcattaaaagaa
caaacaaaacttcttttaattgctccagttgttcttcctgaaaagagaactattgaatct
ttattacaagttttaaaacaacaaggttatgccagaataaaatacaataacaaggtttat
cgaattgataaatttcctattgaagatttcaaaggaaatagtattgatttagtagtagat
agagttgttgttcaacacgatgaagatttctacaaccgcttagctgacgctattcaaaca
gctttttttgaaggaaaaggattttgttatattgaaaatttagaaacagaagctaaaaca
gaatttagtaataaatttgagttagacggtattacttttttagaaccaaatacacatctt
ttcagttttaataatccttacggagcctgtcctacttgtgaaggatacggaaatgtaatt
ggcatcgatgaagatttggtaattcctaacacaggtctatctatttatgaagatgcaatt
ttcccatttagaacagatgcctataaatggtacaaagaaaatttaattttacatgcagat
agttacaatattccaattcacaaaccttggttcgaacttacagaagaacaacaaaattta
gtttgggaaggaacagataaattcatgggaattcatcatctgtttaacgaattagaagaa
aaaagttataaaattcagaacagagttatgttatctcgctacagaggtaaaactaaatgt
catgaatgcgacggaaagcgcttaagaaaagaagcaaattatgttcgtgtaagtggtaaa
acaatttctgatttggtaaatcttccgcttgacgaattgagcgtattctttaaatctatt
accttaaatgaatatgaagagaaaatagcaaaacgattattaactgaaattaataataga
ctgcaatttttaactgatgttggattaagttaccttacattaaatcgaacatctaataca
ttatcaggaggagaaagtcaacgtattaacttggctacttctttaggaagctcgttagtt
ggttctatgtatattttagacgagccaagtattggacttcatccaaaagatacagaacgt
ttaattaaagttcttaaaaacttacgtgaccttggaaatacggtaattgtagttgaacat
gatgaagatatcatgaaagaagccgattacattatcgatattggaccagaagctggaact
cacggaggaaaagttgtagcagaaggaacttacgatgaactaataaaatcgaaaactctt
actgctgaatatttatctgaaaccctggaaattgaagttcctaaacaacgaagaaaaact
aagaatttcattaaaatcttaggagctagagagaataatcttaaaaacatagatgtaact
ttccctctaaataacttaactgtaatcacaggagtttctggtagtggtaaaagtacactt
gtaaaaaaattactgtacccaattatgcagaagaaattaattggttatggagataaaata
ggtcaatacacagatgttgaaggaagttatgaaaacttaaagcacgtagagtttatcgac
caaaatccgataggtagatcatctcgatcaaaccctgttacttacataaaagcttacgac
gatatccgtaaacttctatctacacagaaattatctaaaattagaaactatcaacccaaa
cacttttcttttaatgtagaaggtggtcgttgcgaagtttgtaaaggcgaaggtgtagtt
actatagaaatgcaatttatggccgatgtgcatttacaatgtgatcattgtaaaggtaaa
cgctttaaaaaagaaatattagaagttaattttgaaggaaagaatattgacgatatttta
aacttaactattgatgatgcaattgacttttttacagaaaatggcgcaattaaaatagct
aaaaaattaaaacctcttcaagatgttggtttaggatatgtacaattagggcaatcttct
tctactttatctggtggtgaagcgcaacgtataaaattagcttcatttttaatgaaagga
aatacaaaagataaagccttattcatttttgatgaacctactacaggattacattttcac
gatataaagaagcttttagcctcttttaacgccttaattgaaaaaggacattcaataatt
gttattgagcataatatcgaccttataaagtgtgctgatcacatcatagaccttggtatt
gagggtggtaagaaaggtggtaacttaatttttgagggaacgccagagggtctcacaaaa
gaaaatcagtcattaactggaatttttattaaagaaaagttaaaaaattga
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