Thermincola potens: TherJR_0537
Help
Entry
TherJR_0537 CDS
T01226
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tjr
Thermincola potens
Pathway
tjr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TherJR_0537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tjr03400
]
TherJR_0537
Enzymes [BR:
tjr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TherJR_0537
DNA repair and recombination proteins [BR:
tjr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TherJR_0537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
DEAD
HHH_3
PIF1
NPHP3_N
AAA_28
TrwB_AAD_bind
nSTAND3
SLFN-g3_helicase
AAA_22
Ig_SibA
HHH_2
NTPase_1
AAA
Motif
Other DBs
NCBI-ProteinID:
ADG81416
UniProt:
D5XB96
LinkDB
All DBs
Position
535150..537279
Genome browser
AA seq
709 aa
AA seq
DB search
MSGIVERITYTNEETGFSVIRIRSRGFNGLVTVVGNLAAVSVGAVLRLKGEWKHDSKYGK
QFNAHDYRETVPATVAGIEKYLGSGLIKGIGPVYARRIVNHFREDTLRVIEEQADRLLEV
EGIGQKRVEMIKKAWQEQKEIKNVMLFLQSHGVSASYAVKIYKTYGNESINIVKTNPYRL
ADDIWGIGFKTADKIARQLGFDKNSYERCRSGIIYVLNELANEGHCFAVREQLVSETVKI
LELEEPMVKSTIDRMVEEKWVIPDENNAVYLPPFYFSETGTAKRIKEILAVQAPEPAVDI
ERVIKEVQAECGITYDEVQLEAIKTAVTSKFMVLTGGPGTGKTTATLAIIRVFQKLGASC
ILAAPTGRAAKRLSETTGMEAKTIHRLLEYKPPEGYRRNGENPLECDVLVVDETSMVDII
LMYNLLKAVSNETVVILAGDVDQLPSVGAGNVLKDIIDSGTVPVVRLTRIFRQAMGSAII
TNAHRINRGEMPNLRGGRNSDFFFIEEEDPLKVTETVKDLCTKRLPGYYKIDPINDIQVL
CPMQRGGTGAQNLNTVLQEALNPTNVTIKYGGTVFRLNDKVMQIKNNYEKNVFNGDIGTI
VKIDMEDKTLVIRFDGNDVDYDATELDEVVLAYATTVHKSQGSEYKVVVAPFTMQHYMML
QRNLLYTCVTRAKQVFVLVGSKKAVAIAVSNNKIQRRNTMLAKRLAQLG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggtattgtcgaacggattacatacacaaatgaagaaaccggctttagtgtcatc
aggatcaggtccaggggctttaacggcctggtaaccgttgtcggtaaccttgccgctgtc
agtgtgggagccgtcctgcgccttaagggcgaatggaaacacgacagcaaatacggaaag
caattcaatgcccacgactaccgagagacggttcccgctactgttgccgggattgaaaaa
tacctgggcagcggcctgatcaaaggtatcggaccggtttatgcccgcagaatcgtaaat
catttccgggaagacactctgagagtgatagaggaacaggccgaccgcctgcttgaggta
gaaggcatcggacaaaaacgggtggaaatgatcaaaaaagcatggcaggaacagaaggaa
atcaagaatgtcatgctgtttttacagagccacggggtatcagcctcttatgctgtgaag
atatataaaacctatgggaacgaaagtatcaatatcgttaaaaccaatccctaccgtctg
gcagatgatatctggggtatcggctttaaaacagccgacaagattgcccggcagctcggc
tttgacaagaactcttatgagcgctgccgctcagggattatctatgttttgaacgaactg
gccaatgaaggacactgctttgccgtacgggagcaactggtgtccgaaacggtcaaaata
cttgaactggaagagccaatggttaaatccactattgacaggatggtcgaggaaaagtgg
gttattcccgatgaaaacaacgctgtttatcttccgccgttctatttcagcgaaaccggc
actgccaaaagaatcaaagaaatcctggccgttcaggcccctgaaccggcagtggatata
gaacgggtcatcaaagaggtgcaggcggaatgcggtattacttatgatgaagtccaattg
gaagctatcaagacagcggttacatccaagttcatggtcctgacaggcggtcccggaacc
gggaaaaccactgccactcttgccatcatcagggtatttcagaaactgggcgcttcatgt
atactggcagcccccaccgggagagctgccaaaagattgtccgagaccaccggcatggaa
gccaaaaccatccaccggctgctggagtataagcctcccgagggctacaggcgtaacggc
gagaatcccctggagtgcgatgtgctggttgtcgatgaaacatcaatggttgatattatc
ctgatgtacaatttactgaaagcggtatccaatgaaaccgtcgtcattcttgcgggtgat
gtggaccagcttccgtcggtgggcgccggtaatgtcctgaaagatattattgattccgga
accgtacctgtggtccggctgaccaggattttccgccaggccatgggcagcgccattatc
accaatgcccaccggattaacaggggagaaatgcccaacctcaggggcgggcggaacagc
gacttcttctttattgaagaggaggacccgctgaaagtgacggagactgtcaaagacctc
tgcaccaaaaggctgccgggatactataagattgatccgattaacgacatccaggtttta
tgccccatgcagcggggaggaaccggagcccagaatttgaacaccgtgctgcaggaagct
ttgaatccgaccaatgtcaccatcaaatacggaggaacggtatttcggttaaacgacaag
gtaatgcagataaaaaacaactatgaaaaaaatgtatttaacggcgacatcggtaccatt
gtcaaaattgatatggaggacaaaaccctggttattcggtttgacggaaatgatgtggat
tatgatgccaccgaattggatgaagtagtcctggcctatgctaccaccgtgcacaaaagc
cagggcagtgaatataaggttgtagttgccccgttcaccatgcagcattacatgatgtta
cagagaaacctgctgtatacctgtgtcacgagggcaaagcaggtctttgtcctggtgggt
tcgaagaaggcggtagctatagcggtgtcgaacaataaaattcagcggcgcaataccatg
ctggccaaaaggctggctcaactcggctaa
DBGET
integrated database retrieval system
