Thermincola potens: TherJR_0590
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Entry
TherJR_0590 CDS
T01226
Name
(GenBank) SNF2-related protein
Organism
tjr
Thermincola potens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2_assoc
SNF2-rel_dom
Helicase_C
DEAD
SWIM
Flavi_DEAD
HDA2-3
BOFC_N
Motif
Other DBs
NCBI-ProteinID:
ADG81463
UniProt:
D5XBR5
LinkDB
All DBs
Position
584985..588239
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AA seq
1084 aa
AA seq
DB search
MKNMSLTDSEIRNYARSSSVYLRGYTYYVENRVKGLRFDVEDLAVYATVLGKEPYDVEIT
LSPEGDLYSCWCDCPAFAGYDGICKHIVAVLIAFQRNLRKNGLIIPKADKETALEIINLF
SGLDRQRKKEEVNFEIMLQIMDLSYTLKASAEFRIGLQRLYVMKNIKEFLEKINEGKPVE
FGKNFIFEPELHAFKPADRPVIDFLLEVLALEKASDMYDYYSSNSVFRGKTLVLNDLYLK
KFLDVLGDRPFKFCFLPGSVLSDMTVCQGLPLNFKVERSGDGLALILDTKETPISLTSGG
EYFYWQNRIFRASDEQRKYFFPLLKKYLGSYKKITFPAPLVEPFVSEVLPCIRKTGQVHV
DPVLRENICHEELIAKIYFDRNIENPEGQTGIAARLELHYGDRVINPFSSGPVKGGEPAD
KKIVVRDSRKEQKIFDLLEQAGFTVCQGEIHLFDDEKIFNFIENILPQLRSLAEIYYSED
FKSLRIRATAPFSGRVRLDEKLNLLEFSLQFDDINSDELEQVLNSIKMKKQYFRLRDGSF
LDLRQPELKTVATMIEQLGLDTRDLGKKVINLPKYRALYIDSFLRHKNLHGISRNSAFKH
LVQSIREPQHTDFRVPEELQNVLREYQKTGFKWLKTLASYGLGGILADDMGLGKTLQVIA
FILSEKGAGQPPALVIAPTSLVYNWYEEVKKFAPSLRVEVVTGGPAERQEKLKKLAEADI
VVTSYPLIRRDIEHYRQFEFAYCFLDEAQHIKNPNTINARSVQQINARSYFALTGTPIEN
SLTELWSIFNFIMPGYLLSHKEFQRKYEIPAIKGDDPGILEELSRHVQPFILRRLKRDVL
KELPEKIETRLTAEMTREQEKIYLAYLKQAQGEIMREIGTVGFEKSRMKILAALTRLRQI
CCHPGLFIENYTGDSGKMQLLQEVIEDALAGGHRILLFSQFTSMLGIIREYLVSQNIEYH
YLDGNTRAEQRQEMVRAFNAGDGQVFLISLKAGGTGLNLTGADMVVHFDPWWNPAVEDQA
TDRAYRIGQQQVVQVFKLVTRGTIEEKIFTLQQKKKELIDSVIQPGETFLSRLTEEELRA
IFEI
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacatgtccctgactgacagcgaaataaggaattatgctcgcagttcgtctgta
tatctgcggggatacacttattatgtggaaaacagggtgaaggggctccggtttgatgtg
gaagaccttgcggtttatgcgacggttctggggaaagaaccctatgatgtggaaattact
ttatctccggagggcgacttatacagttgttggtgtgactgccccgcttttgccggttat
gacggtatttgcaaacatattgtggcagtattgatagccttccagcgtaaccttcggaaa
aatggcttaattatcccaaaggctgataaggaaacggctttagaaataataaacctgttt
tccggtctggacaggcagcggaaaaaggaagaggtaaattttgaaataatgctgcagata
atggacctgtcctatactttaaaagcatcggctgaattcagaatcggcctgcaacgtctt
tatgtaatgaaaaatatcaaggagtttttggaaaagattaacgagggaaaaccggtggaa
tttggcaaaaactttatttttgaacctgaactgcacgcctttaaaccggctgaccgccct
gttattgattttttgttggaggtactggctctggagaaggcttcggatatgtacgactat
tactcctccaacagcgtttttcgaggtaaaacccttgttttgaatgacctctacctgaag
aaatttcttgatgttttgggggacaggccgtttaaattttgctttttaccgggttctgtg
ttgtcagatatgacggtctgtcaagggttaccgctgaattttaaggtggaacggtcaggt
gacggactggccctgatcctggatactaaggagacgcccatatccctgacttcaggaggc
gagtatttctattggcaaaaccgcatattcagggcttccgatgaacagagaaagtatttt
tttcctttattgaagaaatatttgggttcatacaaaaaaatcacctttcctgcgcctttg
gtggaaccttttgtttccgaagtgctgccttgcatcagaaaaacagggcaggttcatgtt
gaccctgtcctgcgggaaaacatttgtcatgaggaattaattgccaaaatttattttgac
aggaacatagaaaatccagagggtcagacaggaattgctgcccggcttgaactgcattac
ggcgaccgggtgattaatcctttttcctccgggccggtcaaaggaggagaaccggccgac
aagaaaatagttgtccgtgacagccggaaggaacaaaaaatatttgacctgctggaacag
gcgggatttactgtctgccagggtgaaattcaccttttcgacgatgagaaaatctttaac
tttatcgagaacatactgccgcaactccggagtttggctgagatctattattccgaagat
tttaaaagtctgcgaataagggcgactgcacctttttcagggcgggtccgcctggatgaa
aaactgaatctgctggagttctccctgcagtttgatgatattaacagcgatgagctggaa
caggtcttaaactccatcaagatgaaaaagcagtatttccgtctgcgagacggttcgttt
ctggacctccggcaacccgagcttaaaactgtagctacgatgatagaacagttggggctt
gataccagggaccttggaaagaaggtaatcaacctgcccaaataccgggccctctatatc
gacagttttttaaggcacaaaaatttgcatggtattagtcgcaacagcgccttcaaacac
ctggtgcaaagtattcgggagcctcagcatactgacttccgggtgccggaagaactgcag
aatgtgctgcgggaatatcagaaaacgggtttcaagtggctgaagaccctggcctcttat
gggctgggtggcatattggccgatgacatgggcctggggaaaacacttcaggttatagct
tttattctgtcagaaaaaggggccgggcagccccctgctctggttatagcgcccacatct
cttgtctacaactggtatgaggaagttaaaaaatttgccccgtccttaagggtagaggtg
gtaacaggtggtcctgccgaacggcaggaaaagttgaaaaaactggctgaagccgatata
gtggtcacatcctatcccttaatccgccgggatattgaacattacaggcaatttgagttt
gcttactgtttcctggatgaggcgcagcatataaaaaaccccaataccattaacgccagg
tcggttcagcagattaacgcccggagttactttgccctgacgggaacccctatagaaaat
tcgctgacagagctctggtccattttcaattttatcatgcccggctatttactgtcacac
aaggaatttcagagaaaatatgaaatacctgcaatcaagggcgatgaccccgggattctg
gaagagttgagccggcatgttcagccctttatcctacgccgcctgaaaagagacgtatta
aaagagctaccggaaaaaatcgaaacgaggttaacggcggagatgaccagggagcaggaa
aaaatatacctggcttacctgaaacaggcgcagggggagattatgcgggagattggcaca
gtcggctttgaaaaaagccggatgaagattttggctgctttgacccgtttacgccagatc
tgctgccatcccggcctgtttatagagaattacactggagacagcggtaagatgcaactg
ctgcaggaggtaatcgaagatgctctggccggtggtcatcggattctgctcttttcacag
tttacctccatgctggggataatcagggaatacctggtatcccaaaacattgagtatcat
taccttgacggcaataccagagcggaacaaaggcaggaaatggtgcgcgcgtttaatgca
ggggacggacaggtgttcctgatttccttaaaagcggggggaacgggtctgaacctcaca
ggagccgatatggtagtccactttgacccctggtggaacccggcggtggaagaccaggcc
acagaccgtgcctaccggattggccagcaacaggtggtgcaggtttttaaactggtgacc
aggggtactattgaggaaaaaatattcaccctgcagcagaagaaaaaagagcttatcgac
tcggtaattcagcccggcgaaacattcctttccaggctgacagaagaagaactgagggca
atatttgagatataa
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