Thermincola potens: TherJR_0848
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Entry
TherJR_0848 CDS
T01226
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tjr
Thermincola potens
Pathway
tjr03420
Nucleotide excision repair
tjr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tjr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TherJR_0848
03430 Mismatch repair
TherJR_0848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tjr03400
]
TherJR_0848
Enzymes [BR:
tjr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TherJR_0848
DNA repair and recombination proteins [BR:
tjr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TherJR_0848
MMR (mismatch excision repair)
Other MMR factors
TherJR_0848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
AAA_11
DEAD
Terminase_6N
UDPG_MGDP_dh_C
Ribosomal_S8
DnaG_DnaB_bind
Motif
Other DBs
NCBI-ProteinID:
ADG81715
UniProt:
D5XD67
LinkDB
All DBs
Position
853846..856071
Genome browser
AA seq
741 aa
AA seq
DB search
MTEANLNPEQKEAVEWTEGPLLILAGAGSGKTRVLTYRIAHLIHRKGVSPRNILAITFTN
KAAQEMKERVERFLGYDSRDLWVCTFHSACVRILRMEIEKLGYGRNFVIYDSADQQTLLK
NCLKELNIDDKKYPPRAMQVLISQAKNGLQDPAAFKRQAQDYYQEVGARVYELYQHKLKE
NNAMDFDDLIMKTVELFEKFAQVLDYYQERFKYILVDEYQDTNHAQYRLIRLLAAKYRNL
CVVGDDDQSVYGWRGADIQNILDFERDYPEARVIKLEQNYRSTKNILAAANHVVKRNIGR
KEKSLWTENEEGLLPVFFRAQDQYQEAYYIAERIYRLHLEEDRPYRDFAVLYRTNAQSRV
IEEVFIKNGIPYTIVGGLKFYERKEIKDILAYLRVISNPADNISLQRIINVPRRGIGDTT
MGKIAEYANYQGISHYEALIRAEEIPGLTGRSLSPVKKFGQLIEAFRQTARHSSVTELVN
EVLQQTGYIRELEAEKSVEAQTRLENIKEFLSVTKEFDARAAENRLEDFLAEVSLISDVD
EYTEGADAVVLMTLHSAKGLEFPVVFIAGMEEGIFPHSRSMLDNSQLEEERRLCYVGITR
AKERLYLTAAWERNLFGNTMFNPVSRFIEEIPPALLDTEGGERRRHEQESREMFRGSRDK
DRRSSFADRAHVSPVGSYKIEDRPKESFFHLGDKVQHSKWGVGVVVAVNGKGEDAELSIA
FPDLGIKKLMVRYAPLKKVSG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaagctaatttgaatccggaacaaaaggaagctgtagaatggacggaaggaccg
ctgcttattctggccggagcgggaagcggtaaaacaagggtgttaacttatcggatagcc
catttaatacataggaaaggggtatccccccgcaacatcctggcgattacttttaccaat
aaggctgctcaggaaatgaaagagcgggtggaacgctttttgggatatgattcgcgggac
ctttgggtttgtacttttcattcagcctgtgtgcgtattctgagaatggaaatagagaag
ctagggtatggccggaattttgtaatttacgattcggcagaccaacaaactttactgaaa
aactgtttaaaggaattgaacattgacgataaaaaatatcctccccgggccatgcaagtt
ttgattagtcaggccaagaacggcttgcaggacccggcggcttttaagcggcaggcccag
gactattaccaggaggtcggggcgcgggtttatgaactgtaccagcacaagctaaaggaa
aataatgccatggattttgacgacctgatcatgaaaaccgttgagctgtttgaaaagttt
gcgcaggttctggattattatcaggaaaggtttaaatacattttagtggacgaataccag
gataccaaccacgcccaatacaggctgatcaggctgttggcagccaagtacagaaacctg
tgtgttgtcggagacgacgaccagtcggtatacgggtggcgcggagccgatattcagaat
atccttgatttcgagcgggattacccggaagccagggtaatcaaattggaacagaattac
cgctccacgaaaaacatcctggcggcggcaaatcacgtggtcaaaaggaatataggccgg
aaagaaaaatccctgtggacggaaaatgaggaaggcctgctgcctgtatttttcagggcc
caggaccaataccaggaggcctattatatagctgaacgcatttatcgcctgcatcttgaa
gaggacaggccttaccgtgattttgccgtactttacaggaccaacgcccaatccagggta
attgaggaagtttttatcaagaatgggattccgtataccatcgtaggcggtttgaagttt
tatgagcgtaaggagataaaggacatcctggcttacctccgtgtgatatccaacccggcc
gataacattagcctacagcggattatcaatgtgcccaggcgggggatcggtgacaccact
atgggaaagattgcagaatatgccaattaccagggaatttcgcattacgaggcgctgatc
cgggcagaggaaataccggggcttacagggaggtcactgtcgccggtaaagaagtttggc
caattgatagaggccttccggcagacggcccggcattcttccgtaactgaactggttaat
gaagtgttgcagcaaacggggtatattcgggaactggaagcagaaaaaagcgtagaagcg
caaacccgcctggagaatattaaggaattcctgtcagtgaccaaggaatttgacgccagg
gccgctgaaaaccggttggaagactttctggcggaggtatcactgatttccgatgtggat
gaatatacggaaggggccgatgccgtggtgttgatgacactgcatagtgccaagggcctg
gagtttcccgtggtgtttattgccggtatggaagaggggatcttcccacattcccggtca
atgctggacaacagccagttggaagaggaacgccgcctgtgttacgtggggatcaccagg
gccaaagaacggttataccttacggctgcctgggaaaggaaccttttcggtaacaccatg
tttaaccctgtatcgagatttatcgaggagataccccctgccttactggatacggaaggc
ggcgaaaggcgccgtcacgaacaggagtcccgggaaatgttccggggttcacgggacaaa
gacaggcggagctcttttgctgacagggcccatgtttcgcccgtaggaagttacaaaata
gaggacaggccaaaagaaagtttctttcacctgggtgataaagtacagcatagcaaatgg
ggcgtgggcgtggttgttgccgtcaacggcaagggggaagatgccgaactgagtatcgct
tttcccgacctgggtattaaaaagctgatggtacgatacgcacccttgaagaaggtttcg
ggataa
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